Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Tm6sf2Q8R1J1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.24■■□□□ 1.15
Tm6sf2Q8R1J1 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.23■■□□□ 1.15
Tm6sf2Q8R1J1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.23■■□□□ 1.15
Tm6sf2Q8R1J1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tm6sf2Q8R1J1 Particl-201ENSMUST00000205370 1560 ntBASIC22.22■■□□□ 1.15
Tm6sf2Q8R1J1 Gm11599-201ENSMUST00000118720 878 ntBASIC22.22■■□□□ 1.15
Tm6sf2Q8R1J1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tm6sf2Q8R1J1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.21■■□□□ 1.15
Tm6sf2Q8R1J1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tm6sf2Q8R1J1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tm6sf2Q8R1J1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Tm6sf2Q8R1J1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tm6sf2Q8R1J1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tm6sf2Q8R1J1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tm6sf2Q8R1J1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.19■■□□□ 1.14
Tm6sf2Q8R1J1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.19■■□□□ 1.14
Tm6sf2Q8R1J1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tm6sf2Q8R1J1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tm6sf2Q8R1J1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Tm6sf2Q8R1J1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tm6sf2Q8R1J1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Tm6sf2Q8R1J1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Tm6sf2Q8R1J1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tm6sf2Q8R1J1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tm6sf2Q8R1J1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.13■■□□□ 1.13
Tm6sf2Q8R1J1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf2Q8R1J1 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.13■■□□□ 1.13
Tm6sf2Q8R1J1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.13■■□□□ 1.13
Tm6sf2Q8R1J1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tm6sf2Q8R1J1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tm6sf2Q8R1J1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Tm6sf2Q8R1J1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf2Q8R1J1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Tm6sf2Q8R1J1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tm6sf2Q8R1J1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tm6sf2Q8R1J1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tm6sf2Q8R1J1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.07■■□□□ 1.12
Tm6sf2Q8R1J1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tm6sf2Q8R1J1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tm6sf2Q8R1J1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.06■■□□□ 1.12
Tm6sf2Q8R1J1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tm6sf2Q8R1J1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Tm6sf2Q8R1J1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.05■■□□□ 1.12
Tm6sf2Q8R1J1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tm6sf2Q8R1J1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Tm6sf2Q8R1J1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Tm6sf2Q8R1J1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tm6sf2Q8R1J1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Tm6sf2Q8R1J1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tm6sf2Q8R1J1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tm6sf2Q8R1J1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22■■□□□ 1.11
Tm6sf2Q8R1J1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Tm6sf2Q8R1J1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tm6sf2Q8R1J1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tm6sf2Q8R1J1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tm6sf2Q8R1J1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tm6sf2Q8R1J1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tm6sf2Q8R1J1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Tm6sf2Q8R1J1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tm6sf2Q8R1J1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tm6sf2Q8R1J1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tm6sf2Q8R1J1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tm6sf2Q8R1J1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tm6sf2Q8R1J1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Tm6sf2Q8R1J1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.96■■□□□ 1.11
Tm6sf2Q8R1J1 Gm37136-201ENSMUST00000194368 194 ntBASIC21.96■■□□□ 1.11
Tm6sf2Q8R1J1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tm6sf2Q8R1J1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tm6sf2Q8R1J1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tm6sf2Q8R1J1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Tm6sf2Q8R1J1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tm6sf2Q8R1J1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tm6sf2Q8R1J1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tm6sf2Q8R1J1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tm6sf2Q8R1J1 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.94■■□□□ 1.1
Tm6sf2Q8R1J1 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.94■■□□□ 1.1
Tm6sf2Q8R1J1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tm6sf2Q8R1J1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.93■■□□□ 1.1
Tm6sf2Q8R1J1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tm6sf2Q8R1J1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.92■■□□□ 1.1
Tm6sf2Q8R1J1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tm6sf2Q8R1J1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tm6sf2Q8R1J1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.9■■□□□ 1.1
Tm6sf2Q8R1J1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tm6sf2Q8R1J1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tm6sf2Q8R1J1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Tm6sf2Q8R1J1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.89■■□□□ 1.09
Tm6sf2Q8R1J1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.89■■□□□ 1.09
Tm6sf2Q8R1J1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tm6sf2Q8R1J1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Tm6sf2Q8R1J1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tm6sf2Q8R1J1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tm6sf2Q8R1J1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tm6sf2Q8R1J1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tm6sf2Q8R1J1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tm6sf2Q8R1J1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Tm6sf2Q8R1J1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tm6sf2Q8R1J1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tm6sf2Q8R1J1 Gm4799-201ENSMUST00000095396 657 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms