Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Hmgcll1Q8JZS7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Hmgcll1Q8JZS7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Hmgcll1Q8JZS7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
Hmgcll1Q8JZS7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
Hmgcll1Q8JZS7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hmgcll1Q8JZS7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmgcll1Q8JZS7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmgcll1Q8JZS7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmgcll1Q8JZS7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmgcll1Q8JZS7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Hmgcll1Q8JZS7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hmgcll1Q8JZS7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Hmgcll1Q8JZS7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.63■■□□□ 1.53
Hmgcll1Q8JZS7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hmgcll1Q8JZS7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Hmgcll1Q8JZS7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hmgcll1Q8JZS7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgcll1Q8JZS7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgcll1Q8JZS7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Hmgcll1Q8JZS7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Hmgcll1Q8JZS7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.59■■□□□ 1.53
Hmgcll1Q8JZS7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hmgcll1Q8JZS7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.57■■□□□ 1.52
Hmgcll1Q8JZS7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgcll1Q8JZS7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcll1Q8JZS7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.55■■□□□ 1.52
Hmgcll1Q8JZS7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgcll1Q8JZS7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.53■■□□□ 1.52
Hmgcll1Q8JZS7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.53■■□□□ 1.52
Hmgcll1Q8JZS7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgcll1Q8JZS7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Hmgcll1Q8JZS7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Hmgcll1Q8JZS7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcll1Q8JZS7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.51■■□□□ 1.51
Hmgcll1Q8JZS7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcll1Q8JZS7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgcll1Q8JZS7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Hmgcll1Q8JZS7 Gm37136-201ENSMUST00000194368 194 ntBASIC24.5■■□□□ 1.51
Hmgcll1Q8JZS7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmgcll1Q8JZS7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Hmgcll1Q8JZS7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.48■■□□□ 1.51
Hmgcll1Q8JZS7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgcll1Q8JZS7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgcll1Q8JZS7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.45■■□□□ 1.5
Hmgcll1Q8JZS7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Hmgcll1Q8JZS7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Hmgcll1Q8JZS7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Hmgcll1Q8JZS7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmgcll1Q8JZS7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmgcll1Q8JZS7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmgcll1Q8JZS7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Hmgcll1Q8JZS7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Hmgcll1Q8JZS7 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.39■■□□□ 1.5
Hmgcll1Q8JZS7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Hmgcll1Q8JZS7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.39■■□□□ 1.49
Hmgcll1Q8JZS7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Hmgcll1Q8JZS7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.38■■□□□ 1.49
Hmgcll1Q8JZS7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Hmgcll1Q8JZS7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Hmgcll1Q8JZS7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.38■■□□□ 1.49
Hmgcll1Q8JZS7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.37■■□□□ 1.49
Hmgcll1Q8JZS7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Hmgcll1Q8JZS7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Hmgcll1Q8JZS7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.36■■□□□ 1.49
Hmgcll1Q8JZS7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Hmgcll1Q8JZS7 Gm6311-201ENSMUST00000073790 878 ntBASIC24.36■■□□□ 1.49
Hmgcll1Q8JZS7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hmgcll1Q8JZS7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Hmgcll1Q8JZS7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hmgcll1Q8JZS7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Hmgcll1Q8JZS7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hmgcll1Q8JZS7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Hmgcll1Q8JZS7 Gm4799-201ENSMUST00000095396 657 ntBASIC24.34■■□□□ 1.49
Hmgcll1Q8JZS7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Hmgcll1Q8JZS7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Hmgcll1Q8JZS7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.32■■□□□ 1.48
Hmgcll1Q8JZS7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hmgcll1Q8JZS7 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.32■■□□□ 1.48
Hmgcll1Q8JZS7 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.32■■□□□ 1.48
Hmgcll1Q8JZS7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Hmgcll1Q8JZS7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Hmgcll1Q8JZS7 Gm11175-201ENSMUST00000116172 543 ntBASIC24.3■■□□□ 1.48
Hmgcll1Q8JZS7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.3■■□□□ 1.48
Hmgcll1Q8JZS7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hmgcll1Q8JZS7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hmgcll1Q8JZS7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Hmgcll1Q8JZS7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hmgcll1Q8JZS7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Hmgcll1Q8JZS7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hmgcll1Q8JZS7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Hmgcll1Q8JZS7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.27■■□□□ 1.48
Hmgcll1Q8JZS7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.27■■□□□ 1.48
Hmgcll1Q8JZS7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.27■■□□□ 1.48
Hmgcll1Q8JZS7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hmgcll1Q8JZS7 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.26■■□□□ 1.47
Hmgcll1Q8JZS7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.26■■□□□ 1.47
Hmgcll1Q8JZS7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.25■■□□□ 1.47
Hmgcll1Q8JZS7 Mir3960-201ENSMUST00000198213 73 ntBASIC24.25■■□□□ 1.47
Hmgcll1Q8JZS7 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms