Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rfwd3Q8CIK8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rfwd3Q8CIK8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.04■■□□□ 1.12
Rfwd3Q8CIK8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfwd3Q8CIK8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Rfwd3Q8CIK8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rfwd3Q8CIK8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.03■■□□□ 1.12
Rfwd3Q8CIK8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rfwd3Q8CIK8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rfwd3Q8CIK8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rfwd3Q8CIK8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rfwd3Q8CIK8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rfwd3Q8CIK8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Rfwd3Q8CIK8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Rfwd3Q8CIK8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rfwd3Q8CIK8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rfwd3Q8CIK8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22■■□□□ 1.11
Rfwd3Q8CIK8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22■■□□□ 1.11
Rfwd3Q8CIK8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Rfwd3Q8CIK8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rfwd3Q8CIK8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22■■□□□ 1.11
Rfwd3Q8CIK8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rfwd3Q8CIK8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfwd3Q8CIK8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfwd3Q8CIK8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfwd3Q8CIK8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfwd3Q8CIK8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfwd3Q8CIK8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfwd3Q8CIK8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfwd3Q8CIK8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Rfwd3Q8CIK8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Rfwd3Q8CIK8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfwd3Q8CIK8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Rfwd3Q8CIK8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfwd3Q8CIK8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.96■■□□□ 1.11
Rfwd3Q8CIK8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Rfwd3Q8CIK8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rfwd3Q8CIK8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfwd3Q8CIK8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfwd3Q8CIK8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfwd3Q8CIK8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.94■■□□□ 1.1
Rfwd3Q8CIK8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfwd3Q8CIK8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Rfwd3Q8CIK8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfwd3Q8CIK8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.93■■□□□ 1.1
Rfwd3Q8CIK8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfwd3Q8CIK8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfwd3Q8CIK8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfwd3Q8CIK8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfwd3Q8CIK8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.9■■□□□ 1.1
Rfwd3Q8CIK8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfwd3Q8CIK8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rfwd3Q8CIK8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rfwd3Q8CIK8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rfwd3Q8CIK8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rfwd3Q8CIK8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rfwd3Q8CIK8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rfwd3Q8CIK8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rfwd3Q8CIK8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rfwd3Q8CIK8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
Rfwd3Q8CIK8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Rfwd3Q8CIK8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.85■■□□□ 1.09
Rfwd3Q8CIK8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rfwd3Q8CIK8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rfwd3Q8CIK8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfwd3Q8CIK8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfwd3Q8CIK8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rfwd3Q8CIK8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rfwd3Q8CIK8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rfwd3Q8CIK8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.82■■□□□ 1.08
Rfwd3Q8CIK8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfwd3Q8CIK8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Rfwd3Q8CIK8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rfwd3Q8CIK8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rfwd3Q8CIK8 Particl-201ENSMUST00000205370 1560 ntBASIC21.81■■□□□ 1.08
Rfwd3Q8CIK8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rfwd3Q8CIK8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rfwd3Q8CIK8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
Rfwd3Q8CIK8 Gm7432-201ENSMUST00000210343 879 ntBASIC21.8■■□□□ 1.08
Rfwd3Q8CIK8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfwd3Q8CIK8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfwd3Q8CIK8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfwd3Q8CIK8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfwd3Q8CIK8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.79■■□□□ 1.08
Rfwd3Q8CIK8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfwd3Q8CIK8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Rfwd3Q8CIK8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfwd3Q8CIK8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfwd3Q8CIK8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfwd3Q8CIK8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfwd3Q8CIK8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Rfwd3Q8CIK8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.74■■□□□ 1.07
Rfwd3Q8CIK8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.74■■□□□ 1.07
Rfwd3Q8CIK8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rfwd3Q8CIK8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.73■■□□□ 1.07
Rfwd3Q8CIK8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rfwd3Q8CIK8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfwd3Q8CIK8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Rfwd3Q8CIK8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfwd3Q8CIK8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms