Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Rdh1Q8CGV4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rdh1Q8CGV4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.15■■□□□ 1.3
Rdh1Q8CGV4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rdh1Q8CGV4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rdh1Q8CGV4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rdh1Q8CGV4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.14■■□□□ 1.29
Rdh1Q8CGV4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rdh1Q8CGV4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Rdh1Q8CGV4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Rdh1Q8CGV4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rdh1Q8CGV4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rdh1Q8CGV4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rdh1Q8CGV4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rdh1Q8CGV4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Rdh1Q8CGV4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.1■■□□□ 1.29
Rdh1Q8CGV4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.1■■□□□ 1.29
Rdh1Q8CGV4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rdh1Q8CGV4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rdh1Q8CGV4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.09■■□□□ 1.29
Rdh1Q8CGV4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rdh1Q8CGV4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.08■■□□□ 1.29
Rdh1Q8CGV4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rdh1Q8CGV4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rdh1Q8CGV4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rdh1Q8CGV4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rdh1Q8CGV4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rdh1Q8CGV4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rdh1Q8CGV4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Rdh1Q8CGV4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rdh1Q8CGV4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rdh1Q8CGV4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Rdh1Q8CGV4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rdh1Q8CGV4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.04■■□□□ 1.28
Rdh1Q8CGV4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rdh1Q8CGV4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rdh1Q8CGV4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rdh1Q8CGV4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rdh1Q8CGV4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rdh1Q8CGV4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.03■■□□□ 1.28
Rdh1Q8CGV4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Rdh1Q8CGV4 Gm6311-201ENSMUST00000073790 878 ntBASIC23.02■■□□□ 1.28
Rdh1Q8CGV4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Rdh1Q8CGV4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rdh1Q8CGV4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Rdh1Q8CGV4 Gm37136-201ENSMUST00000194368 194 ntBASIC23■■□□□ 1.27
Rdh1Q8CGV4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rdh1Q8CGV4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rdh1Q8CGV4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rdh1Q8CGV4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rdh1Q8CGV4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rdh1Q8CGV4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.99■■□□□ 1.27
Rdh1Q8CGV4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Rdh1Q8CGV4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Rdh1Q8CGV4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.97■■□□□ 1.27
Rdh1Q8CGV4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Rdh1Q8CGV4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rdh1Q8CGV4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rdh1Q8CGV4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.96■■□□□ 1.27
Rdh1Q8CGV4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rdh1Q8CGV4 Gm11175-201ENSMUST00000116172 543 ntBASIC22.95■■□□□ 1.26
Rdh1Q8CGV4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.95■■□□□ 1.26
Rdh1Q8CGV4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.95■■□□□ 1.26
Rdh1Q8CGV4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Rdh1Q8CGV4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rdh1Q8CGV4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rdh1Q8CGV4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Rdh1Q8CGV4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rdh1Q8CGV4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rdh1Q8CGV4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rdh1Q8CGV4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rdh1Q8CGV4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.91■■□□□ 1.26
Rdh1Q8CGV4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.91■■□□□ 1.26
Rdh1Q8CGV4 Gm4799-201ENSMUST00000095396 657 ntBASIC22.91■■□□□ 1.26
Rdh1Q8CGV4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rdh1Q8CGV4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rdh1Q8CGV4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rdh1Q8CGV4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rdh1Q8CGV4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rdh1Q8CGV4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.87■■□□□ 1.25
Rdh1Q8CGV4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rdh1Q8CGV4 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.86■■□□□ 1.25
Rdh1Q8CGV4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rdh1Q8CGV4 Mir3960-201ENSMUST00000198213 73 ntBASIC22.85■■□□□ 1.25
Rdh1Q8CGV4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rdh1Q8CGV4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rdh1Q8CGV4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.84■■□□□ 1.25
Rdh1Q8CGV4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rdh1Q8CGV4 Mir6538-201ENSMUST00000183713 110 ntBASIC22.84■■□□□ 1.25
Rdh1Q8CGV4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rdh1Q8CGV4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rdh1Q8CGV4 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.82■■□□□ 1.24
Rdh1Q8CGV4 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.82■■□□□ 1.24
Rdh1Q8CGV4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rdh1Q8CGV4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rdh1Q8CGV4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.82■■□□□ 1.24
Rdh1Q8CGV4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rdh1Q8CGV4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rdh1Q8CGV4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rdh1Q8CGV4 Gm45364-201ENSMUST00000210883 159 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms