Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Usp44Q8C2S0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Usp44Q8C2S0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28■■■□□ 2.07
Usp44Q8C2S0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28■■■□□ 2.07
Usp44Q8C2S0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Usp44Q8C2S0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Usp44Q8C2S0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.99■■■□□ 2.07
Usp44Q8C2S0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Usp44Q8C2S0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Usp44Q8C2S0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Usp44Q8C2S0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Usp44Q8C2S0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Usp44Q8C2S0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Usp44Q8C2S0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Usp44Q8C2S0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Usp44Q8C2S0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Usp44Q8C2S0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Usp44Q8C2S0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.96■■■□□ 2.07
Usp44Q8C2S0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.96■■■□□ 2.07
Usp44Q8C2S0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Usp44Q8C2S0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Usp44Q8C2S0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Usp44Q8C2S0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.93■■■□□ 2.06
Usp44Q8C2S0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Usp44Q8C2S0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Usp44Q8C2S0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Usp44Q8C2S0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.92■■■□□ 2.06
Usp44Q8C2S0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Usp44Q8C2S0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Usp44Q8C2S0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Usp44Q8C2S0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Usp44Q8C2S0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Usp44Q8C2S0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Usp44Q8C2S0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Usp44Q8C2S0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Usp44Q8C2S0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.86■■■□□ 2.05
Usp44Q8C2S0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Usp44Q8C2S0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.86■■■□□ 2.05
Usp44Q8C2S0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Usp44Q8C2S0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.86■■■□□ 2.05
Usp44Q8C2S0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Usp44Q8C2S0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
Usp44Q8C2S0 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.82■■■□□ 2.04
Usp44Q8C2S0 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.82■■■□□ 2.04
Usp44Q8C2S0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Usp44Q8C2S0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Usp44Q8C2S0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Usp44Q8C2S0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Usp44Q8C2S0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Usp44Q8C2S0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Usp44Q8C2S0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Usp44Q8C2S0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Usp44Q8C2S0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Usp44Q8C2S0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.77■■■□□ 2.04
Usp44Q8C2S0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Usp44Q8C2S0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Usp44Q8C2S0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.76■■■□□ 2.04
Usp44Q8C2S0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Usp44Q8C2S0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Usp44Q8C2S0 Particl-201ENSMUST00000205370 1560 ntBASIC27.74■■■□□ 2.03
Usp44Q8C2S0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Usp44Q8C2S0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Usp44Q8C2S0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Usp44Q8C2S0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Usp44Q8C2S0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Usp44Q8C2S0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.73■■■□□ 2.03
Usp44Q8C2S0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Usp44Q8C2S0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Usp44Q8C2S0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Usp44Q8C2S0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.71■■■□□ 2.03
Usp44Q8C2S0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Usp44Q8C2S0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
Usp44Q8C2S0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Usp44Q8C2S0 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.69■■■□□ 2.02
Usp44Q8C2S0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
Usp44Q8C2S0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp44Q8C2S0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp44Q8C2S0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Usp44Q8C2S0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Usp44Q8C2S0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Usp44Q8C2S0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Usp44Q8C2S0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Usp44Q8C2S0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Usp44Q8C2S0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.67■■■□□ 2.02
Usp44Q8C2S0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Usp44Q8C2S0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Usp44Q8C2S0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Usp44Q8C2S0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Usp44Q8C2S0 Gm37136-201ENSMUST00000194368 194 ntBASIC27.64■■■□□ 2.02
Usp44Q8C2S0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Usp44Q8C2S0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.63■■■□□ 2.01
Usp44Q8C2S0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Usp44Q8C2S0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.62■■■□□ 2.01
Usp44Q8C2S0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.62■■■□□ 2.01
Usp44Q8C2S0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.61■■■□□ 2.01
Usp44Q8C2S0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Usp44Q8C2S0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Usp44Q8C2S0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Usp44Q8C2S0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Usp44Q8C2S0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms