Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tsen54Q8C2A2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Tsen54Q8C2A2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tsen54Q8C2A2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tsen54Q8C2A2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tsen54Q8C2A2 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.49■□□□□ 0.71
Tsen54Q8C2A2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tsen54Q8C2A2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.48■□□□□ 0.71
Tsen54Q8C2A2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tsen54Q8C2A2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tsen54Q8C2A2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.47■□□□□ 0.71
Tsen54Q8C2A2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Tsen54Q8C2A2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Tsen54Q8C2A2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tsen54Q8C2A2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tsen54Q8C2A2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tsen54Q8C2A2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tsen54Q8C2A2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tsen54Q8C2A2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.45■□□□□ 0.7
Tsen54Q8C2A2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsen54Q8C2A2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsen54Q8C2A2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsen54Q8C2A2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tsen54Q8C2A2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsen54Q8C2A2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsen54Q8C2A2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tsen54Q8C2A2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tsen54Q8C2A2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tsen54Q8C2A2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tsen54Q8C2A2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tsen54Q8C2A2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsen54Q8C2A2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tsen54Q8C2A2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.41■□□□□ 0.7
Tsen54Q8C2A2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.41■□□□□ 0.7
Tsen54Q8C2A2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tsen54Q8C2A2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tsen54Q8C2A2 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.4■□□□□ 0.7
Tsen54Q8C2A2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tsen54Q8C2A2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tsen54Q8C2A2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
Tsen54Q8C2A2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tsen54Q8C2A2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tsen54Q8C2A2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tsen54Q8C2A2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tsen54Q8C2A2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tsen54Q8C2A2 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.37■□□□□ 0.69
Tsen54Q8C2A2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tsen54Q8C2A2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tsen54Q8C2A2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tsen54Q8C2A2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tsen54Q8C2A2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Tsen54Q8C2A2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tsen54Q8C2A2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Tsen54Q8C2A2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tsen54Q8C2A2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tsen54Q8C2A2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tsen54Q8C2A2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tsen54Q8C2A2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tsen54Q8C2A2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tsen54Q8C2A2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tsen54Q8C2A2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.33■□□□□ 0.69
Tsen54Q8C2A2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tsen54Q8C2A2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tsen54Q8C2A2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tsen54Q8C2A2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tsen54Q8C2A2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tsen54Q8C2A2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tsen54Q8C2A2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tsen54Q8C2A2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tsen54Q8C2A2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tsen54Q8C2A2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tsen54Q8C2A2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tsen54Q8C2A2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tsen54Q8C2A2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tsen54Q8C2A2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tsen54Q8C2A2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Tsen54Q8C2A2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tsen54Q8C2A2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tsen54Q8C2A2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tsen54Q8C2A2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tsen54Q8C2A2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tsen54Q8C2A2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tsen54Q8C2A2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tsen54Q8C2A2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tsen54Q8C2A2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tsen54Q8C2A2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tsen54Q8C2A2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tsen54Q8C2A2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tsen54Q8C2A2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.27■□□□□ 0.68
Tsen54Q8C2A2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tsen54Q8C2A2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tsen54Q8C2A2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tsen54Q8C2A2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms