Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm5786-201ENSMUST00000085368 882 ntBASIC33,21■■■□□ 2,91
Cps1Q8C196 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC33,2■■■□□ 2,91
Cps1Q8C196 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC33,2■■■□□ 2,9
Cps1Q8C196 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC33,19■■■□□ 2,9
Cps1Q8C196 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC33,18■■■□□ 2,9
Cps1Q8C196 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC33,18■■■□□ 2,9
Cps1Q8C196 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC33,18■■■□□ 2,9
Cps1Q8C196 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC33,17■■■□□ 2,9
Cps1Q8C196 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC33,17■■■□□ 2,9
Cps1Q8C196 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC33,16■■■□□ 2,9
Cps1Q8C196 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC33,15■■■□□ 2,9
Cps1Q8C196 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC33,14■■■□□ 2,9
Cps1Q8C196 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC33,14■■■□□ 2,9
Cps1Q8C196 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC33,13■■■□□ 2,89
Cps1Q8C196 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC33,12■■■□□ 2,89
Cps1Q8C196 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC33,12■■■□□ 2,89
Cps1Q8C196 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC33,12■■■□□ 2,89
Cps1Q8C196 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC33,11■■■□□ 2,89
Cps1Q8C196 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC33,1■■■□□ 2,89
Cps1Q8C196 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC33,1■■■□□ 2,89
Cps1Q8C196 Gm37136-201ENSMUST00000194368 194 ntBASIC33,08■■■□□ 2,89
Cps1Q8C196 Mir3960-201ENSMUST00000198213 73 ntBASIC33,08■■■□□ 2,89
Cps1Q8C196 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC33,08■■■□□ 2,89
Cps1Q8C196 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC33,08■■■□□ 2,89
Cps1Q8C196 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC33,07■■■□□ 2,89
Cps1Q8C196 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC33,07■■■□□ 2,89
Cps1Q8C196 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC33,07■■■□□ 2,88
Cps1Q8C196 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC33,07■■■□□ 2,88
Cps1Q8C196 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC33,06■■■□□ 2,88
Cps1Q8C196 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Cps1Q8C196 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Cps1Q8C196 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC33,05■■■□□ 2,88
Cps1Q8C196 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC33,02■■■□□ 2,88
Cps1Q8C196 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC33,02■■■□□ 2,88
Cps1Q8C196 Gm27502-201ENSMUST00000183495 199 ntBASIC33,01■■■□□ 2,87
Cps1Q8C196 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2,87
Cps1Q8C196 Gm9905-201ENSMUST00000065740 1845 ntBASIC33■■■□□ 2,87
Cps1Q8C196 Gm16437-201ENSMUST00000025669 507 ntBASIC32,99■■■□□ 2,87
Cps1Q8C196 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32,98■■■□□ 2,87
Cps1Q8C196 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC32,97■■■□□ 2,87
Cps1Q8C196 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC32,97■■■□□ 2,87
Cps1Q8C196 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC32,97■■■□□ 2,87
Cps1Q8C196 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC32,96■■■□□ 2,87
Cps1Q8C196 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC32,94■■■□□ 2,86
Cps1Q8C196 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32,94■■■□□ 2,86
Cps1Q8C196 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC32,93■■■□□ 2,86
Cps1Q8C196 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC32,93■■■□□ 2,86
Cps1Q8C196 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC32,92■■■□□ 2,86
Cps1Q8C196 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC32,92■■■□□ 2,86
Cps1Q8C196 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC32,92■■■□□ 2,86
Cps1Q8C196 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC32,92■■■□□ 2,86
Cps1Q8C196 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC32,92■■■□□ 2,86
Cps1Q8C196 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC32,9■■■□□ 2,86
Cps1Q8C196 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC32,89■■■□□ 2,86
Cps1Q8C196 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC32,89■■■□□ 2,86
Cps1Q8C196 Gm13889-201ENSMUST00000099689 1386 ntBASIC32,89■■■□□ 2,86
Cps1Q8C196 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32,88■■■□□ 2,85
Cps1Q8C196 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC32,88■■■□□ 2,85
Cps1Q8C196 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC32,88■■■□□ 2,85
Cps1Q8C196 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Cps1Q8C196 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Cps1Q8C196 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC32,87■■■□□ 2,85
Cps1Q8C196 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC32,87■■■□□ 2,85
Cps1Q8C196 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC32,87■■■□□ 2,85
Cps1Q8C196 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC32,87■■■□□ 2,85
Cps1Q8C196 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC32,86■■■□□ 2,85
Cps1Q8C196 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC32,86■■■□□ 2,85
Cps1Q8C196 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Cps1Q8C196 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32,86■■■□□ 2,85
Cps1Q8C196 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC32,85■■■□□ 2,85
Cps1Q8C196 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC32,85■■■□□ 2,85
Cps1Q8C196 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
Cps1Q8C196 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC32,84■■■□□ 2,85
Cps1Q8C196 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC32,83■■■□□ 2,85
Cps1Q8C196 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC32,82■■■□□ 2,85
Cps1Q8C196 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC32,82■■■□□ 2,84
Cps1Q8C196 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC32,81■■■□□ 2,84
Cps1Q8C196 Gm12818-201ENSMUST00000117562 1349 ntBASIC32,81■■■□□ 2,84
Cps1Q8C196 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC32,81■■■□□ 2,84
Cps1Q8C196 AC151971.4-201ENSMUST00000214717 704 ntBASIC32,8■■■□□ 2,84
Cps1Q8C196 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Cps1Q8C196 Gm7332-201ENSMUST00000118351 454 ntBASIC32,79■■■□□ 2,84
Cps1Q8C196 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Cps1Q8C196 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC32,78■■■□□ 2,84
Cps1Q8C196 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC32,78■■■□□ 2,84
Cps1Q8C196 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC32,78■■■□□ 2,84
Cps1Q8C196 AC122317.2-201ENSMUST00000218708 1248 ntBASIC32,78■■■□□ 2,84
Cps1Q8C196 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC32,78■■■□□ 2,84
Cps1Q8C196 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC32,77■■■□□ 2,84
Cps1Q8C196 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC32,77■■■□□ 2,84
Cps1Q8C196 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC32,76■■■□□ 2,83
Cps1Q8C196 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC32,76■■■□□ 2,83
Cps1Q8C196 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC32,76■■■□□ 2,83
Cps1Q8C196 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC32,76■■■□□ 2,83
Cps1Q8C196 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC32,76■■■□□ 2,83
Cps1Q8C196 Gm14523-201ENSMUST00000117260 558 ntBASIC32,75■■■□□ 2,83
Cps1Q8C196 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC32,75■■■□□ 2,83
Cps1Q8C196 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC32,74■■■□□ 2,83
Cps1Q8C196 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC32,74■■■□□ 2,83
Cps1Q8C196 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms