Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc30Q8BVF4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc30Q8BVF4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc30Q8BVF4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Ccdc30Q8BVF4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.76■■■□□ 2.52
Ccdc30Q8BVF4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Ccdc30Q8BVF4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ccdc30Q8BVF4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.73■■■□□ 2.51
Ccdc30Q8BVF4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc30Q8BVF4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Ccdc30Q8BVF4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Ccdc30Q8BVF4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.69■■■□□ 2.5
Ccdc30Q8BVF4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.69■■■□□ 2.5
Ccdc30Q8BVF4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.68■■■□□ 2.5
Ccdc30Q8BVF4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Ccdc30Q8BVF4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc30Q8BVF4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Gm6821-201ENSMUST00000107540 542 ntBASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc30Q8BVF4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc30Q8BVF4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Ccdc30Q8BVF4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc30Q8BVF4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc30Q8BVF4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc30Q8BVF4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc30Q8BVF4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
Ccdc30Q8BVF4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.61■■■□□ 2.49
Ccdc30Q8BVF4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc30Q8BVF4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.6■■■□□ 2.49
Ccdc30Q8BVF4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Ccdc30Q8BVF4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc30Q8BVF4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.59■■■□□ 2.49
Ccdc30Q8BVF4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc30Q8BVF4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Ccdc30Q8BVF4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Ccdc30Q8BVF4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
Ccdc30Q8BVF4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.57■■■□□ 2.48
Ccdc30Q8BVF4 Gm8503-201ENSMUST00000118131 455 ntBASIC30.55■■■□□ 2.48
Ccdc30Q8BVF4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.55■■■□□ 2.48
Ccdc30Q8BVF4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.55■■■□□ 2.48
Ccdc30Q8BVF4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Ccdc30Q8BVF4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc30Q8BVF4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc30Q8BVF4 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.52■■■□□ 2.48
Ccdc30Q8BVF4 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.52■■■□□ 2.48
Ccdc30Q8BVF4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.51■■■□□ 2.47
Ccdc30Q8BVF4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Ccdc30Q8BVF4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc30Q8BVF4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.49■■■□□ 2.47
Ccdc30Q8BVF4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc30Q8BVF4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.48■■■□□ 2.47
Ccdc30Q8BVF4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc30Q8BVF4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc30Q8BVF4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Ccdc30Q8BVF4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc30Q8BVF4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.46
Ccdc30Q8BVF4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc30Q8BVF4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Ccdc30Q8BVF4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Ccdc30Q8BVF4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc30Q8BVF4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc30Q8BVF4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
Ccdc30Q8BVF4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Particl-201ENSMUST00000205370 1560 ntBASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc30Q8BVF4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ccdc30Q8BVF4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ccdc30Q8BVF4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc30Q8BVF4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc30Q8BVF4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ccdc30Q8BVF4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc30Q8BVF4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc30Q8BVF4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.36■■■□□ 2.45
Ccdc30Q8BVF4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc30Q8BVF4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc30Q8BVF4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc30Q8BVF4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc30Q8BVF4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc30Q8BVF4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Ccdc30Q8BVF4 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.3■■■□□ 2.44
Ccdc30Q8BVF4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc30Q8BVF4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc30Q8BVF4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc30Q8BVF4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc30Q8BVF4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc30Q8BVF4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms