Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Suds3Q8BR65 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Suds3Q8BR65 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Suds3Q8BR65 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Suds3Q8BR65 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Suds3Q8BR65 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Suds3Q8BR65 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.87■■□□□ 1.41
Suds3Q8BR65 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Suds3Q8BR65 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Suds3Q8BR65 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Suds3Q8BR65 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Suds3Q8BR65 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Suds3Q8BR65 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Suds3Q8BR65 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Suds3Q8BR65 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Suds3Q8BR65 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Suds3Q8BR65 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.82■■□□□ 1.4
Suds3Q8BR65 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.82■■□□□ 1.4
Suds3Q8BR65 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Suds3Q8BR65 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Suds3Q8BR65 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Suds3Q8BR65 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Suds3Q8BR65 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Suds3Q8BR65 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.81■■□□□ 1.4
Suds3Q8BR65 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Suds3Q8BR65 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Suds3Q8BR65 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.8■■□□□ 1.4
Suds3Q8BR65 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Suds3Q8BR65 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Suds3Q8BR65 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Suds3Q8BR65 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Suds3Q8BR65 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Suds3Q8BR65 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.78■■□□□ 1.4
Suds3Q8BR65 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Suds3Q8BR65 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Suds3Q8BR65 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.78■■□□□ 1.4
Suds3Q8BR65 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Suds3Q8BR65 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Suds3Q8BR65 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Suds3Q8BR65 Gm30023-201ENSMUST00000197970 889 ntBASIC23.76■■□□□ 1.39
Suds3Q8BR65 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Suds3Q8BR65 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.74■■□□□ 1.39
Suds3Q8BR65 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Suds3Q8BR65 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Suds3Q8BR65 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
Suds3Q8BR65 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Suds3Q8BR65 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.74■■□□□ 1.39
Suds3Q8BR65 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Suds3Q8BR65 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Suds3Q8BR65 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.73■■□□□ 1.39
Suds3Q8BR65 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.72■■□□□ 1.39
Suds3Q8BR65 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Suds3Q8BR65 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Suds3Q8BR65 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Suds3Q8BR65 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Suds3Q8BR65 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Suds3Q8BR65 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Suds3Q8BR65 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Suds3Q8BR65 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Suds3Q8BR65 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Suds3Q8BR65 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Suds3Q8BR65 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Suds3Q8BR65 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
Suds3Q8BR65 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.69■■□□□ 1.38
Suds3Q8BR65 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Suds3Q8BR65 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Suds3Q8BR65 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Suds3Q8BR65 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Suds3Q8BR65 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.68■■□□□ 1.38
Suds3Q8BR65 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Suds3Q8BR65 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.68■■□□□ 1.38
Suds3Q8BR65 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Suds3Q8BR65 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Suds3Q8BR65 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Suds3Q8BR65 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Suds3Q8BR65 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Suds3Q8BR65 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Suds3Q8BR65 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Suds3Q8BR65 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.65■■□□□ 1.38
Suds3Q8BR65 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Suds3Q8BR65 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Suds3Q8BR65 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Suds3Q8BR65 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Suds3Q8BR65 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Suds3Q8BR65 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Suds3Q8BR65 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Suds3Q8BR65 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Suds3Q8BR65 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Suds3Q8BR65 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Suds3Q8BR65 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Suds3Q8BR65 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Suds3Q8BR65 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Suds3Q8BR65 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Suds3Q8BR65 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Suds3Q8BR65 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Suds3Q8BR65 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Suds3Q8BR65 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.6■■□□□ 1.37
Suds3Q8BR65 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Suds3Q8BR65 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.59■■□□□ 1.37
Suds3Q8BR65 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms