Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhlrc1Q8BR37 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nhlrc1Q8BR37 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nhlrc1Q8BR37 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nhlrc1Q8BR37 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nhlrc1Q8BR37 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nhlrc1Q8BR37 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nhlrc1Q8BR37 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nhlrc1Q8BR37 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.12■□□□□ 0.49
Nhlrc1Q8BR37 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nhlrc1Q8BR37 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nhlrc1Q8BR37 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nhlrc1Q8BR37 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhlrc1Q8BR37 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nhlrc1Q8BR37 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nhlrc1Q8BR37 Gm11175-201ENSMUST00000116172 543 ntBASIC18.11■□□□□ 0.49
Nhlrc1Q8BR37 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.11■□□□□ 0.49
Nhlrc1Q8BR37 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nhlrc1Q8BR37 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.11■□□□□ 0.49
Nhlrc1Q8BR37 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nhlrc1Q8BR37 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.09■□□□□ 0.49
Nhlrc1Q8BR37 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nhlrc1Q8BR37 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nhlrc1Q8BR37 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nhlrc1Q8BR37 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Nhlrc1Q8BR37 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nhlrc1Q8BR37 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nhlrc1Q8BR37 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhlrc1Q8BR37 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhlrc1Q8BR37 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhlrc1Q8BR37 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhlrc1Q8BR37 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhlrc1Q8BR37 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nhlrc1Q8BR37 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nhlrc1Q8BR37 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nhlrc1Q8BR37 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhlrc1Q8BR37 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nhlrc1Q8BR37 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nhlrc1Q8BR37 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhlrc1Q8BR37 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhlrc1Q8BR37 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nhlrc1Q8BR37 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nhlrc1Q8BR37 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhlrc1Q8BR37 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
Nhlrc1Q8BR37 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nhlrc1Q8BR37 Gm4799-201ENSMUST00000095396 657 ntBASIC18.03■□□□□ 0.48
Nhlrc1Q8BR37 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhlrc1Q8BR37 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhlrc1Q8BR37 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.02■□□□□ 0.48
Nhlrc1Q8BR37 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhlrc1Q8BR37 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nhlrc1Q8BR37 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.02■□□□□ 0.48
Nhlrc1Q8BR37 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.02■□□□□ 0.48
Nhlrc1Q8BR37 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.02■□□□□ 0.47
Nhlrc1Q8BR37 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhlrc1Q8BR37 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhlrc1Q8BR37 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nhlrc1Q8BR37 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.01■□□□□ 0.47
Nhlrc1Q8BR37 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.01■□□□□ 0.47
Nhlrc1Q8BR37 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nhlrc1Q8BR37 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nhlrc1Q8BR37 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhlrc1Q8BR37 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhlrc1Q8BR37 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nhlrc1Q8BR37 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18■□□□□ 0.47
Nhlrc1Q8BR37 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhlrc1Q8BR37 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhlrc1Q8BR37 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nhlrc1Q8BR37 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhlrc1Q8BR37 Cap2-205ENSMUST00000225824 1634 ntBASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 Gm37136-201ENSMUST00000194368 194 ntBASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.98■□□□□ 0.47
Nhlrc1Q8BR37 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nhlrc1Q8BR37 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhlrc1Q8BR37 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhlrc1Q8BR37 Mir3960-201ENSMUST00000198213 73 ntBASIC17.96■□□□□ 0.47
Nhlrc1Q8BR37 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nhlrc1Q8BR37 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nhlrc1Q8BR37 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Nhlrc1Q8BR37 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nhlrc1Q8BR37 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nhlrc1Q8BR37 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhlrc1Q8BR37 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.94■□□□□ 0.46
Nhlrc1Q8BR37 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhlrc1Q8BR37 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nhlrc1Q8BR37 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms