Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.08■□□□□ 0.81
Rnf144bQ8BKD6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf144bQ8BKD6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf144bQ8BKD6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf144bQ8BKD6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf144bQ8BKD6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf144bQ8BKD6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf144bQ8BKD6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf144bQ8BKD6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf144bQ8BKD6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf144bQ8BKD6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf144bQ8BKD6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf144bQ8BKD6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf144bQ8BKD6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf144bQ8BKD6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf144bQ8BKD6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf144bQ8BKD6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf144bQ8BKD6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf144bQ8BKD6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf144bQ8BKD6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf144bQ8BKD6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf144bQ8BKD6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf144bQ8BKD6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf144bQ8BKD6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf144bQ8BKD6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf144bQ8BKD6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20■□□□□ 0.79
Rnf144bQ8BKD6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf144bQ8BKD6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf144bQ8BKD6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf144bQ8BKD6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.98■□□□□ 0.79
Rnf144bQ8BKD6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf144bQ8BKD6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.98■□□□□ 0.79
Rnf144bQ8BKD6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.97■□□□□ 0.79
Rnf144bQ8BKD6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf144bQ8BKD6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rnf144bQ8BKD6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf144bQ8BKD6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf144bQ8BKD6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rnf144bQ8BKD6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf144bQ8BKD6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rnf144bQ8BKD6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf144bQ8BKD6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rnf144bQ8BKD6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf144bQ8BKD6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf144bQ8BKD6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf144bQ8BKD6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf144bQ8BKD6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf144bQ8BKD6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf144bQ8BKD6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.94■□□□□ 0.78
Rnf144bQ8BKD6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rnf144bQ8BKD6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf144bQ8BKD6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf144bQ8BKD6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf144bQ8BKD6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf144bQ8BKD6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf144bQ8BKD6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rnf144bQ8BKD6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf144bQ8BKD6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf144bQ8BKD6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rnf144bQ8BKD6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf144bQ8BKD6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf144bQ8BKD6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf144bQ8BKD6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf144bQ8BKD6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf144bQ8BKD6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf144bQ8BKD6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf144bQ8BKD6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf144bQ8BKD6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf144bQ8BKD6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf144bQ8BKD6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf144bQ8BKD6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rnf144bQ8BKD6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Rnf144bQ8BKD6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf144bQ8BKD6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf144bQ8BKD6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf144bQ8BKD6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.88■□□□□ 0.77
Rnf144bQ8BKD6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf144bQ8BKD6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf144bQ8BKD6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf144bQ8BKD6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf144bQ8BKD6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf144bQ8BKD6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf144bQ8BKD6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rnf144bQ8BKD6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Rnf144bQ8BKD6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.85■□□□□ 0.77
Rnf144bQ8BKD6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.85■□□□□ 0.77
Rnf144bQ8BKD6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf144bQ8BKD6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf144bQ8BKD6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rnf144bQ8BKD6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rnf144bQ8BKD6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf144bQ8BKD6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf144bQ8BKD6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf144bQ8BKD6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf144bQ8BKD6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf144bQ8BKD6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rnf144bQ8BKD6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.83■□□□□ 0.76
Rnf144bQ8BKD6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf144bQ8BKD6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.82■□□□□ 0.76
Rnf144bQ8BKD6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms