Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srrm4Q8BKA3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.4■□□□□ 0.86
Srrm4Q8BKA3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Srrm4Q8BKA3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Srrm4Q8BKA3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Srrm4Q8BKA3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Srrm4Q8BKA3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Srrm4Q8BKA3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Srrm4Q8BKA3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Srrm4Q8BKA3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Srrm4Q8BKA3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.38■□□□□ 0.85
Srrm4Q8BKA3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Srrm4Q8BKA3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.37■□□□□ 0.85
Srrm4Q8BKA3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Srrm4Q8BKA3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Srrm4Q8BKA3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.36■□□□□ 0.85
Srrm4Q8BKA3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Srrm4Q8BKA3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.36■□□□□ 0.85
Srrm4Q8BKA3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Srrm4Q8BKA3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Srrm4Q8BKA3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Srrm4Q8BKA3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Srrm4Q8BKA3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
Srrm4Q8BKA3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.34■□□□□ 0.85
Srrm4Q8BKA3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Srrm4Q8BKA3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Srrm4Q8BKA3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm4Q8BKA3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm4Q8BKA3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm4Q8BKA3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Srrm4Q8BKA3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Srrm4Q8BKA3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Srrm4Q8BKA3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Srrm4Q8BKA3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm4Q8BKA3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm4Q8BKA3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm4Q8BKA3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Srrm4Q8BKA3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Srrm4Q8BKA3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm4Q8BKA3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srrm4Q8BKA3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm4Q8BKA3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm4Q8BKA3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.29■□□□□ 0.84
Srrm4Q8BKA3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm4Q8BKA3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srrm4Q8BKA3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm4Q8BKA3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm4Q8BKA3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Srrm4Q8BKA3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm4Q8BKA3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srrm4Q8BKA3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm4Q8BKA3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm4Q8BKA3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm4Q8BKA3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Srrm4Q8BKA3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Srrm4Q8BKA3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm4Q8BKA3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm4Q8BKA3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srrm4Q8BKA3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Srrm4Q8BKA3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Srrm4Q8BKA3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Srrm4Q8BKA3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Srrm4Q8BKA3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.24■□□□□ 0.83
Srrm4Q8BKA3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm4Q8BKA3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm4Q8BKA3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srrm4Q8BKA3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm4Q8BKA3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm4Q8BKA3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srrm4Q8BKA3 Gm7432-201ENSMUST00000210343 879 ntBASIC20.22■□□□□ 0.83
Srrm4Q8BKA3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.22■□□□□ 0.83
Srrm4Q8BKA3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Srrm4Q8BKA3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm4Q8BKA3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm4Q8BKA3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Srrm4Q8BKA3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srrm4Q8BKA3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srrm4Q8BKA3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Srrm4Q8BKA3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.19■□□□□ 0.82
Srrm4Q8BKA3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.19■□□□□ 0.82
Srrm4Q8BKA3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Srrm4Q8BKA3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Srrm4Q8BKA3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm4Q8BKA3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm4Q8BKA3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm4Q8BKA3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm4Q8BKA3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
Srrm4Q8BKA3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Srrm4Q8BKA3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Srrm4Q8BKA3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Srrm4Q8BKA3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srrm4Q8BKA3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.16■□□□□ 0.82
Srrm4Q8BKA3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms