Protein–RNA interactions for Protein: Q8BGI7

Lrrc39, Leucine-rich repeat-containing protein 39, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc39Q8BGI7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrc39Q8BGI7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrc39Q8BGI7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrc39Q8BGI7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrc39Q8BGI7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrc39Q8BGI7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lrrc39Q8BGI7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Lrrc39Q8BGI7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrc39Q8BGI7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.45■■□□□ 1.02
Lrrc39Q8BGI7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrc39Q8BGI7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.45■■□□□ 1.02
Lrrc39Q8BGI7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.45■■□□□ 1.02
Lrrc39Q8BGI7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrc39Q8BGI7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrc39Q8BGI7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc39Q8BGI7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc39Q8BGI7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc39Q8BGI7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrc39Q8BGI7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc39Q8BGI7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc39Q8BGI7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.42■■□□□ 1.02
Lrrc39Q8BGI7 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.42■■□□□ 1.02
Lrrc39Q8BGI7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc39Q8BGI7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrc39Q8BGI7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.41■■□□□ 1.02
Lrrc39Q8BGI7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.4■■□□□ 1.02
Lrrc39Q8BGI7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc39Q8BGI7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc39Q8BGI7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc39Q8BGI7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrc39Q8BGI7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lrrc39Q8BGI7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Lrrc39Q8BGI7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lrrc39Q8BGI7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Lrrc39Q8BGI7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrc39Q8BGI7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Lrrc39Q8BGI7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Lrrc39Q8BGI7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc39Q8BGI7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrc39Q8BGI7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.38■■□□□ 1.01
Lrrc39Q8BGI7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc39Q8BGI7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.37■■□□□ 1.01
Lrrc39Q8BGI7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc39Q8BGI7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc39Q8BGI7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrc39Q8BGI7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrc39Q8BGI7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Lrrc39Q8BGI7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Lrrc39Q8BGI7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrc39Q8BGI7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Lrrc39Q8BGI7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Lrrc39Q8BGI7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrc39Q8BGI7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrc39Q8BGI7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrc39Q8BGI7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Lrrc39Q8BGI7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Lrrc39Q8BGI7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrc39Q8BGI7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrc39Q8BGI7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.33■■□□□ 1.01
Lrrc39Q8BGI7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrc39Q8BGI7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrc39Q8BGI7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Lrrc39Q8BGI7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lrrc39Q8BGI7 Particl-201ENSMUST00000205370 1560 ntBASIC21.32■■□□□ 1
Lrrc39Q8BGI7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lrrc39Q8BGI7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lrrc39Q8BGI7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.32■■□□□ 1
Lrrc39Q8BGI7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.32■■□□□ 1
Lrrc39Q8BGI7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrc39Q8BGI7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrc39Q8BGI7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.31■■□□□ 1
Lrrc39Q8BGI7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lrrc39Q8BGI7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc39Q8BGI7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Lrrc39Q8BGI7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.29■■□□□ 1
Lrrc39Q8BGI7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc39Q8BGI7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrc39Q8BGI7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrc39Q8BGI7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc39Q8BGI7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc39Q8BGI7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc39Q8BGI7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lrrc39Q8BGI7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.27■■□□□ 1
Lrrc39Q8BGI7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc39Q8BGI7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc39Q8BGI7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc39Q8BGI7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc39Q8BGI7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Lrrc39Q8BGI7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Lrrc39Q8BGI7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc39Q8BGI7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc39Q8BGI7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc39Q8BGI7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc39Q8BGI7 Gm45855-201ENSMUST00000212546 880 ntBASIC21.24■□□□□ 0.99
Lrrc39Q8BGI7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc39Q8BGI7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc39Q8BGI7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc39Q8BGI7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc39Q8BGI7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc39Q8BGI7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms