Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.59■■■□□ 2.01
Trnp1Q80ZI1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.59■■■□□ 2.01
Trnp1Q80ZI1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Trnp1Q80ZI1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Trnp1Q80ZI1 Gm7332-201ENSMUST00000118351 454 ntBASIC27.58■■■□□ 2.01
Trnp1Q80ZI1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.58■■■□□ 2.01
Trnp1Q80ZI1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Trnp1Q80ZI1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Trnp1Q80ZI1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.57■■■□□ 2
Trnp1Q80ZI1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Trnp1Q80ZI1 Gm45364-201ENSMUST00000210883 159 ntBASIC27.56■■■□□ 2
Trnp1Q80ZI1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Trnp1Q80ZI1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Trnp1Q80ZI1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Trnp1Q80ZI1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Trnp1Q80ZI1 Gm27502-201ENSMUST00000183495 199 ntBASIC27.52■■■□□ 2
Trnp1Q80ZI1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Trnp1Q80ZI1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Trnp1Q80ZI1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Trnp1Q80ZI1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Trnp1Q80ZI1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Trnp1Q80ZI1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trnp1Q80ZI1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Trnp1Q80ZI1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Trnp1Q80ZI1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trnp1Q80ZI1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.49■■□□□ 1.99
Trnp1Q80ZI1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trnp1Q80ZI1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Trnp1Q80ZI1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Trnp1Q80ZI1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Trnp1Q80ZI1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Trnp1Q80ZI1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.45■■□□□ 1.98
Trnp1Q80ZI1 Gm37136-201ENSMUST00000194368 194 ntBASIC27.43■■□□□ 1.98
Trnp1Q80ZI1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trnp1Q80ZI1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trnp1Q80ZI1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.43■■□□□ 1.98
Trnp1Q80ZI1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Trnp1Q80ZI1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.41■■□□□ 1.98
Trnp1Q80ZI1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trnp1Q80ZI1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Trnp1Q80ZI1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.4■■□□□ 1.98
Trnp1Q80ZI1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trnp1Q80ZI1 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.39■■□□□ 1.98
Trnp1Q80ZI1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trnp1Q80ZI1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.38■■□□□ 1.97
Trnp1Q80ZI1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trnp1Q80ZI1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.37■■□□□ 1.97
Trnp1Q80ZI1 Gm14523-201ENSMUST00000117260 558 ntBASIC27.37■■□□□ 1.97
Trnp1Q80ZI1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trnp1Q80ZI1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trnp1Q80ZI1 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.37■■□□□ 1.97
Trnp1Q80ZI1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trnp1Q80ZI1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.36■■□□□ 1.97
Trnp1Q80ZI1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Trnp1Q80ZI1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trnp1Q80ZI1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Trnp1Q80ZI1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Trnp1Q80ZI1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Trnp1Q80ZI1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trnp1Q80ZI1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Trnp1Q80ZI1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trnp1Q80ZI1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.31■■□□□ 1.96
Trnp1Q80ZI1 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.31■■□□□ 1.96
Trnp1Q80ZI1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.31■■□□□ 1.96
Trnp1Q80ZI1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Trnp1Q80ZI1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Trnp1Q80ZI1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Trnp1Q80ZI1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.29■■□□□ 1.96
Trnp1Q80ZI1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trnp1Q80ZI1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Trnp1Q80ZI1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.27■■□□□ 1.96
Trnp1Q80ZI1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.27■■□□□ 1.96
Trnp1Q80ZI1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trnp1Q80ZI1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Trnp1Q80ZI1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trnp1Q80ZI1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Trnp1Q80ZI1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trnp1Q80ZI1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Trnp1Q80ZI1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trnp1Q80ZI1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trnp1Q80ZI1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.23■■□□□ 1.95
Trnp1Q80ZI1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trnp1Q80ZI1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trnp1Q80ZI1 Gm15039-201ENSMUST00000118914 875 ntBASIC27.22■■□□□ 1.95
Trnp1Q80ZI1 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.22■■□□□ 1.95
Trnp1Q80ZI1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Trnp1Q80ZI1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Trnp1Q80ZI1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trnp1Q80ZI1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Trnp1Q80ZI1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Trnp1Q80ZI1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trnp1Q80ZI1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.19■■□□□ 1.94
Trnp1Q80ZI1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trnp1Q80ZI1 Gm5812-201ENSMUST00000061073 957 ntBASIC27.19■■□□□ 1.94
Trnp1Q80ZI1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trnp1Q80ZI1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trnp1Q80ZI1 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.18■■□□□ 1.94
Trnp1Q80ZI1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trnp1Q80ZI1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trnp1Q80ZI1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.17■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms