Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Negr1Q80Z24 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Negr1Q80Z24 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Negr1Q80Z24 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Negr1Q80Z24 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Negr1Q80Z24 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Negr1Q80Z24 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.75■□□□□ 0.91
Negr1Q80Z24 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Negr1Q80Z24 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Negr1Q80Z24 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Negr1Q80Z24 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Negr1Q80Z24 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Negr1Q80Z24 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Negr1Q80Z24 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Negr1Q80Z24 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Negr1Q80Z24 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.72■□□□□ 0.91
Negr1Q80Z24 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
Negr1Q80Z24 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Negr1Q80Z24 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.71■□□□□ 0.91
Negr1Q80Z24 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Negr1Q80Z24 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Negr1Q80Z24 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Negr1Q80Z24 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Negr1Q80Z24 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Negr1Q80Z24 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.69■□□□□ 0.9
Negr1Q80Z24 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
Negr1Q80Z24 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Negr1Q80Z24 Nkain2-201ENSMUST00000092602 558 ntBASIC20.68■□□□□ 0.9
Negr1Q80Z24 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Negr1Q80Z24 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Negr1Q80Z24 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.67■□□□□ 0.9
Negr1Q80Z24 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Negr1Q80Z24 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Negr1Q80Z24 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.66■□□□□ 0.9
Negr1Q80Z24 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Negr1Q80Z24 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.65■□□□□ 0.9
Negr1Q80Z24 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.65■□□□□ 0.9
Negr1Q80Z24 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Negr1Q80Z24 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Negr1Q80Z24 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.64■□□□□ 0.89
Negr1Q80Z24 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Negr1Q80Z24 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Negr1Q80Z24 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.63■□□□□ 0.89
Negr1Q80Z24 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Negr1Q80Z24 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Negr1Q80Z24 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Negr1Q80Z24 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Negr1Q80Z24 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Negr1Q80Z24 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Negr1Q80Z24 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Negr1Q80Z24 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Negr1Q80Z24 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Negr1Q80Z24 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.61■□□□□ 0.89
Negr1Q80Z24 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Negr1Q80Z24 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Negr1Q80Z24 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Negr1Q80Z24 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Negr1Q80Z24 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Negr1Q80Z24 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Negr1Q80Z24 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Negr1Q80Z24 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Negr1Q80Z24 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Negr1Q80Z24 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.59■□□□□ 0.89
Negr1Q80Z24 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Negr1Q80Z24 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Negr1Q80Z24 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Negr1Q80Z24 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Negr1Q80Z24 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Negr1Q80Z24 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Negr1Q80Z24 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Negr1Q80Z24 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.55■□□□□ 0.88
Negr1Q80Z24 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.55■□□□□ 0.88
Negr1Q80Z24 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Negr1Q80Z24 Gm6821-201ENSMUST00000107540 542 ntBASIC20.54■□□□□ 0.88
Negr1Q80Z24 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Negr1Q80Z24 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Negr1Q80Z24 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Negr1Q80Z24 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Negr1Q80Z24 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Negr1Q80Z24 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Negr1Q80Z24 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.52■□□□□ 0.88
Negr1Q80Z24 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Negr1Q80Z24 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Negr1Q80Z24 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Negr1Q80Z24 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Negr1Q80Z24 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.5■□□□□ 0.87
Negr1Q80Z24 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Negr1Q80Z24 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.49■□□□□ 0.87
Negr1Q80Z24 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Negr1Q80Z24 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Negr1Q80Z24 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Negr1Q80Z24 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Negr1Q80Z24 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.48■□□□□ 0.87
Negr1Q80Z24 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Negr1Q80Z24 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Negr1Q80Z24 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Negr1Q80Z24 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Negr1Q80Z24 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Negr1Q80Z24 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Negr1Q80Z24 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms