Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Kdm1aQ6ZQ88 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Kdm1aQ6ZQ88 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Kdm1aQ6ZQ88 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Kdm1aQ6ZQ88 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.07■■□□□ 1.76
Kdm1aQ6ZQ88 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Kdm1aQ6ZQ88 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Kdm1aQ6ZQ88 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
Kdm1aQ6ZQ88 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.06■■□□□ 1.76
Kdm1aQ6ZQ88 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.06■■□□□ 1.76
Kdm1aQ6ZQ88 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.06■■□□□ 1.76
Kdm1aQ6ZQ88 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Kdm1aQ6ZQ88 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Kdm1aQ6ZQ88 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Kdm1aQ6ZQ88 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Kdm1aQ6ZQ88 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.04■■□□□ 1.76
Kdm1aQ6ZQ88 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Kdm1aQ6ZQ88 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Kdm1aQ6ZQ88 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
Kdm1aQ6ZQ88 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Kdm1aQ6ZQ88 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Kdm1aQ6ZQ88 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Kdm1aQ6ZQ88 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Kdm1aQ6ZQ88 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Kdm1aQ6ZQ88 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Kdm1aQ6ZQ88 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26■■□□□ 1.75
Kdm1aQ6ZQ88 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Kdm1aQ6ZQ88 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Kdm1aQ6ZQ88 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Kdm1aQ6ZQ88 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Kdm1aQ6ZQ88 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Kdm1aQ6ZQ88 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Kdm1aQ6ZQ88 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Kdm1aQ6ZQ88 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Kdm1aQ6ZQ88 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Kdm1aQ6ZQ88 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
Kdm1aQ6ZQ88 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Kdm1aQ6ZQ88 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Kdm1aQ6ZQ88 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1aQ6ZQ88 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Kdm1aQ6ZQ88 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Kdm1aQ6ZQ88 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Kdm1aQ6ZQ88 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Kdm1aQ6ZQ88 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Kdm1aQ6ZQ88 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Kdm1aQ6ZQ88 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Kdm1aQ6ZQ88 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Kdm1aQ6ZQ88 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Kdm1aQ6ZQ88 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Kdm1aQ6ZQ88 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.87■■□□□ 1.73
Kdm1aQ6ZQ88 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.87■■□□□ 1.73
Kdm1aQ6ZQ88 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.86■■□□□ 1.73
Kdm1aQ6ZQ88 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Kdm1aQ6ZQ88 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Kdm1aQ6ZQ88 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.85■■□□□ 1.73
Kdm1aQ6ZQ88 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Kdm1aQ6ZQ88 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1aQ6ZQ88 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1aQ6ZQ88 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1aQ6ZQ88 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1aQ6ZQ88 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Kdm1aQ6ZQ88 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Kdm1aQ6ZQ88 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
Kdm1aQ6ZQ88 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.83■■□□□ 1.73
Kdm1aQ6ZQ88 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Kdm1aQ6ZQ88 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Kdm1aQ6ZQ88 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Kdm1aQ6ZQ88 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Kdm1aQ6ZQ88 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Kdm1aQ6ZQ88 Particl-201ENSMUST00000205370 1560 ntBASIC25.82■■□□□ 1.72
Kdm1aQ6ZQ88 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Kdm1aQ6ZQ88 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Kdm1aQ6ZQ88 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Kdm1aQ6ZQ88 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Kdm1aQ6ZQ88 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Kdm1aQ6ZQ88 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Kdm1aQ6ZQ88 Nkain2-201ENSMUST00000092602 558 ntBASIC25.79■■□□□ 1.72
Kdm1aQ6ZQ88 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Kdm1aQ6ZQ88 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Kdm1aQ6ZQ88 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Kdm1aQ6ZQ88 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Kdm1aQ6ZQ88 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.77■■□□□ 1.72
Kdm1aQ6ZQ88 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Kdm1aQ6ZQ88 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Kdm1aQ6ZQ88 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Kdm1aQ6ZQ88 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Kdm1aQ6ZQ88 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Kdm1aQ6ZQ88 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Kdm1aQ6ZQ88 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Kdm1aQ6ZQ88 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Kdm1aQ6ZQ88 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.72■■□□□ 1.71
Kdm1aQ6ZQ88 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.72■■□□□ 1.71
Kdm1aQ6ZQ88 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms