Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rif1Q6PR54 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rif1Q6PR54 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rif1Q6PR54 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.61■□□□□ 0.89
Rif1Q6PR54 Gm13238-201ENSMUST00000117655 780 ntBASIC20.6■□□□□ 0.89
Rif1Q6PR54 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rif1Q6PR54 Gm9959-201ENSMUST00000068277 390 ntBASIC20.6■□□□□ 0.89
Rif1Q6PR54 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rif1Q6PR54 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rif1Q6PR54 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rif1Q6PR54 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rif1Q6PR54 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rif1Q6PR54 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rif1Q6PR54 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rif1Q6PR54 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rif1Q6PR54 Gm14117-201ENSMUST00000122417 843 ntBASIC20.55■□□□□ 0.88
Rif1Q6PR54 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rif1Q6PR54 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.55■□□□□ 0.88
Rif1Q6PR54 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rif1Q6PR54 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rif1Q6PR54 Particl-201ENSMUST00000205370 1560 ntBASIC20.54■□□□□ 0.88
Rif1Q6PR54 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rif1Q6PR54 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.54■□□□□ 0.88
Rif1Q6PR54 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rif1Q6PR54 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rif1Q6PR54 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rif1Q6PR54 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.52■□□□□ 0.88
Rif1Q6PR54 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rif1Q6PR54 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.51■□□□□ 0.87
Rif1Q6PR54 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rif1Q6PR54 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.51■□□□□ 0.87
Rif1Q6PR54 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rif1Q6PR54 Gm45364-201ENSMUST00000210883 159 ntBASIC20.49■□□□□ 0.87
Rif1Q6PR54 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rif1Q6PR54 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rif1Q6PR54 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.49■□□□□ 0.87
Rif1Q6PR54 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rif1Q6PR54 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rif1Q6PR54 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rif1Q6PR54 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rif1Q6PR54 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rif1Q6PR54 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rif1Q6PR54 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rif1Q6PR54 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.47■□□□□ 0.87
Rif1Q6PR54 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rif1Q6PR54 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rif1Q6PR54 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rif1Q6PR54 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rif1Q6PR54 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rif1Q6PR54 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rif1Q6PR54 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rif1Q6PR54 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.45■□□□□ 0.86
Rif1Q6PR54 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rif1Q6PR54 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.44■□□□□ 0.86
Rif1Q6PR54 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rif1Q6PR54 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rif1Q6PR54 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rif1Q6PR54 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rif1Q6PR54 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rif1Q6PR54 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rif1Q6PR54 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rif1Q6PR54 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rif1Q6PR54 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rif1Q6PR54 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rif1Q6PR54 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rif1Q6PR54 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rif1Q6PR54 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rif1Q6PR54 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.4■□□□□ 0.86
Rif1Q6PR54 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rif1Q6PR54 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Rif1Q6PR54 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.38■□□□□ 0.85
Rif1Q6PR54 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rif1Q6PR54 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rif1Q6PR54 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rif1Q6PR54 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.37■□□□□ 0.85
Rif1Q6PR54 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rif1Q6PR54 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rif1Q6PR54 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rif1Q6PR54 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.37■□□□□ 0.85
Rif1Q6PR54 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.37■□□□□ 0.85
Rif1Q6PR54 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.36■□□□□ 0.85
Rif1Q6PR54 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rif1Q6PR54 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rif1Q6PR54 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.36■□□□□ 0.85
Rif1Q6PR54 Gm45444-201ENSMUST00000211394 898 ntBASIC20.36■□□□□ 0.85
Rif1Q6PR54 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rif1Q6PR54 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rif1Q6PR54 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.35■□□□□ 0.85
Rif1Q6PR54 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Rif1Q6PR54 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.35■□□□□ 0.85
Rif1Q6PR54 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.35■□□□□ 0.85
Rif1Q6PR54 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rif1Q6PR54 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rif1Q6PR54 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.34■□□□□ 0.85
Rif1Q6PR54 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.34■□□□□ 0.85
Rif1Q6PR54 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Rif1Q6PR54 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rif1Q6PR54 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rif1Q6PR54 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.33■□□□□ 0.85
Rif1Q6PR54 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms