Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Scube3Q66PY1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Scube3Q66PY1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Scube3Q66PY1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Scube3Q66PY1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Scube3Q66PY1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scube3Q66PY1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scube3Q66PY1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Scube3Q66PY1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Scube3Q66PY1 Gm7432-201ENSMUST00000210343 879 ntBASIC24.85■■□□□ 1.57
Scube3Q66PY1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Scube3Q66PY1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Scube3Q66PY1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scube3Q66PY1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Scube3Q66PY1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.83■■□□□ 1.57
Scube3Q66PY1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.83■■□□□ 1.57
Scube3Q66PY1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.83■■□□□ 1.57
Scube3Q66PY1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Scube3Q66PY1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Scube3Q66PY1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.82■■□□□ 1.56
Scube3Q66PY1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scube3Q66PY1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.81■■□□□ 1.56
Scube3Q66PY1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.81■■□□□ 1.56
Scube3Q66PY1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scube3Q66PY1 Particl-201ENSMUST00000205370 1560 ntBASIC24.8■■□□□ 1.56
Scube3Q66PY1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Scube3Q66PY1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scube3Q66PY1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
Scube3Q66PY1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scube3Q66PY1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Scube3Q66PY1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scube3Q66PY1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scube3Q66PY1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scube3Q66PY1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scube3Q66PY1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.76■■□□□ 1.55
Scube3Q66PY1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scube3Q66PY1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Scube3Q66PY1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.74■■□□□ 1.55
Scube3Q66PY1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scube3Q66PY1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scube3Q66PY1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Scube3Q66PY1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Scube3Q66PY1 Gm11599-201ENSMUST00000118720 878 ntBASIC24.72■■□□□ 1.55
Scube3Q66PY1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Scube3Q66PY1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Scube3Q66PY1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Scube3Q66PY1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Scube3Q66PY1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.7■■□□□ 1.54
Scube3Q66PY1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.7■■□□□ 1.54
Scube3Q66PY1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Scube3Q66PY1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scube3Q66PY1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scube3Q66PY1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scube3Q66PY1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Scube3Q66PY1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Scube3Q66PY1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Scube3Q66PY1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scube3Q66PY1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scube3Q66PY1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Scube3Q66PY1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scube3Q66PY1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.66■■□□□ 1.54
Scube3Q66PY1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scube3Q66PY1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scube3Q66PY1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Scube3Q66PY1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Scube3Q66PY1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Scube3Q66PY1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Scube3Q66PY1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Scube3Q66PY1 Gm37136-201ENSMUST00000194368 194 ntBASIC24.62■■□□□ 1.53
Scube3Q66PY1 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.62■■□□□ 1.53
Scube3Q66PY1 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.62■■□□□ 1.53
Scube3Q66PY1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Scube3Q66PY1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scube3Q66PY1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.61■■□□□ 1.53
Scube3Q66PY1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Scube3Q66PY1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scube3Q66PY1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scube3Q66PY1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scube3Q66PY1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Scube3Q66PY1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Scube3Q66PY1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Scube3Q66PY1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Scube3Q66PY1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Scube3Q66PY1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Scube3Q66PY1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Scube3Q66PY1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Scube3Q66PY1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Scube3Q66PY1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Scube3Q66PY1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Scube3Q66PY1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Scube3Q66PY1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scube3Q66PY1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scube3Q66PY1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Scube3Q66PY1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Scube3Q66PY1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.53■■□□□ 1.52
Scube3Q66PY1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Scube3Q66PY1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Scube3Q66PY1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Scube3Q66PY1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Scube3Q66PY1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms