Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.1■■■□□ 2.09
Rnf20Q5DTM8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rnf20Q5DTM8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Rnf20Q5DTM8 Nkain2-201ENSMUST00000092602 558 ntBASIC28.09■■■□□ 2.09
Rnf20Q5DTM8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Rnf20Q5DTM8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Rnf20Q5DTM8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Rnf20Q5DTM8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Rnf20Q5DTM8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rnf20Q5DTM8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.06■■■□□ 2.08
Rnf20Q5DTM8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rnf20Q5DTM8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rnf20Q5DTM8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.04■■■□□ 2.08
Rnf20Q5DTM8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Rnf20Q5DTM8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rnf20Q5DTM8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.03■■■□□ 2.08
Rnf20Q5DTM8 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.02■■■□□ 2.08
Rnf20Q5DTM8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rnf20Q5DTM8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28■■■□□ 2.07
Rnf20Q5DTM8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rnf20Q5DTM8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Rnf20Q5DTM8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rnf20Q5DTM8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rnf20Q5DTM8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rnf20Q5DTM8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Rnf20Q5DTM8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rnf20Q5DTM8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Rnf20Q5DTM8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Rnf20Q5DTM8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Rnf20Q5DTM8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.95■■■□□ 2.06
Rnf20Q5DTM8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Rnf20Q5DTM8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rnf20Q5DTM8 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.94■■■□□ 2.06
Rnf20Q5DTM8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rnf20Q5DTM8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.92■■■□□ 2.06
Rnf20Q5DTM8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Rnf20Q5DTM8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.92■■■□□ 2.06
Rnf20Q5DTM8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rnf20Q5DTM8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.91■■■□□ 2.06
Rnf20Q5DTM8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rnf20Q5DTM8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Rnf20Q5DTM8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Rnf20Q5DTM8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.9■■■□□ 2.06
Rnf20Q5DTM8 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.89■■■□□ 2.06
Rnf20Q5DTM8 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.89■■■□□ 2.06
Rnf20Q5DTM8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.05
Rnf20Q5DTM8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.88■■■□□ 2.05
Rnf20Q5DTM8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.88■■■□□ 2.05
Rnf20Q5DTM8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Rnf20Q5DTM8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
Rnf20Q5DTM8 Particl-201ENSMUST00000205370 1560 ntBASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.86■■■□□ 2.05
Rnf20Q5DTM8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Rnf20Q5DTM8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.85■■■□□ 2.05
Rnf20Q5DTM8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rnf20Q5DTM8 Gm6821-201ENSMUST00000107540 542 ntBASIC27.84■■■□□ 2.05
Rnf20Q5DTM8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rnf20Q5DTM8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rnf20Q5DTM8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rnf20Q5DTM8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rnf20Q5DTM8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rnf20Q5DTM8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rnf20Q5DTM8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rnf20Q5DTM8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rnf20Q5DTM8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rnf20Q5DTM8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
Rnf20Q5DTM8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rnf20Q5DTM8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rnf20Q5DTM8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rnf20Q5DTM8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rnf20Q5DTM8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rnf20Q5DTM8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.74■■■□□ 2.03
Rnf20Q5DTM8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Rnf20Q5DTM8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Rnf20Q5DTM8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rnf20Q5DTM8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rnf20Q5DTM8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms