Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Rc3h1Q4VGL6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rc3h1Q4VGL6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Rc3h1Q4VGL6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Rc3h1Q4VGL6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.66■■■□□ 2.02
Rc3h1Q4VGL6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rc3h1Q4VGL6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Rc3h1Q4VGL6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.65■■■□□ 2.02
Rc3h1Q4VGL6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.65■■■□□ 2.02
Rc3h1Q4VGL6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.64■■■□□ 2.02
Rc3h1Q4VGL6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Rc3h1Q4VGL6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.64■■■□□ 2.02
Rc3h1Q4VGL6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.64■■■□□ 2.02
Rc3h1Q4VGL6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rc3h1Q4VGL6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
Rc3h1Q4VGL6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Rc3h1Q4VGL6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
Rc3h1Q4VGL6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.61■■■□□ 2.01
Rc3h1Q4VGL6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Rc3h1Q4VGL6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.6■■■□□ 2.01
Rc3h1Q4VGL6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.6■■■□□ 2.01
Rc3h1Q4VGL6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Rc3h1Q4VGL6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Rc3h1Q4VGL6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
Rc3h1Q4VGL6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rc3h1Q4VGL6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rc3h1Q4VGL6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rc3h1Q4VGL6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rc3h1Q4VGL6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Rc3h1Q4VGL6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.55■■■□□ 2
Rc3h1Q4VGL6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.53■■■□□ 2
Rc3h1Q4VGL6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.53■■■□□ 2
Rc3h1Q4VGL6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.53■■■□□ 2
Rc3h1Q4VGL6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Rc3h1Q4VGL6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
Rc3h1Q4VGL6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rc3h1Q4VGL6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Rc3h1Q4VGL6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rc3h1Q4VGL6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rc3h1Q4VGL6 Gm11175-201ENSMUST00000116172 543 ntBASIC27.49■■□□□ 1.99
Rc3h1Q4VGL6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.49■■□□□ 1.99
Rc3h1Q4VGL6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rc3h1Q4VGL6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rc3h1Q4VGL6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rc3h1Q4VGL6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rc3h1Q4VGL6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Rc3h1Q4VGL6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Rc3h1Q4VGL6 Gm37136-201ENSMUST00000194368 194 ntBASIC27.45■■□□□ 1.98
Rc3h1Q4VGL6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rc3h1Q4VGL6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Rc3h1Q4VGL6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
Rc3h1Q4VGL6 Gm6311-201ENSMUST00000073790 878 ntBASIC27.44■■□□□ 1.98
Rc3h1Q4VGL6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rc3h1Q4VGL6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rc3h1Q4VGL6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Rc3h1Q4VGL6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rc3h1Q4VGL6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.41■■□□□ 1.98
Rc3h1Q4VGL6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Rc3h1Q4VGL6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Rc3h1Q4VGL6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.39■■□□□ 1.98
Rc3h1Q4VGL6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.39■■□□□ 1.98
Rc3h1Q4VGL6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rc3h1Q4VGL6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Rc3h1Q4VGL6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Rc3h1Q4VGL6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Rc3h1Q4VGL6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rc3h1Q4VGL6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rc3h1Q4VGL6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rc3h1Q4VGL6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rc3h1Q4VGL6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.33■■□□□ 1.97
Rc3h1Q4VGL6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rc3h1Q4VGL6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.32■■□□□ 1.96
Rc3h1Q4VGL6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rc3h1Q4VGL6 Gm4799-201ENSMUST00000095396 657 ntBASIC27.3■■□□□ 1.96
Rc3h1Q4VGL6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rc3h1Q4VGL6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rc3h1Q4VGL6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.28■■□□□ 1.96
Rc3h1Q4VGL6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rc3h1Q4VGL6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.28■■□□□ 1.96
Rc3h1Q4VGL6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rc3h1Q4VGL6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rc3h1Q4VGL6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rc3h1Q4VGL6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rc3h1Q4VGL6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Rc3h1Q4VGL6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rc3h1Q4VGL6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Rc3h1Q4VGL6 Gm45364-201ENSMUST00000210883 159 ntBASIC27.23■■□□□ 1.95
Rc3h1Q4VGL6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.22■■□□□ 1.95
Rc3h1Q4VGL6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rc3h1Q4VGL6 Mir3960-201ENSMUST00000198213 73 ntBASIC27.21■■□□□ 1.95
Rc3h1Q4VGL6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.21■■□□□ 1.95
Rc3h1Q4VGL6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rc3h1Q4VGL6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Rc3h1Q4VGL6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rc3h1Q4VGL6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.2■■□□□ 1.94
Rc3h1Q4VGL6 Mir6538-201ENSMUST00000183713 110 ntBASIC27.2■■□□□ 1.94
Rc3h1Q4VGL6 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.19■■□□□ 1.94
Rc3h1Q4VGL6 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.19■■□□□ 1.94
Rc3h1Q4VGL6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rc3h1Q4VGL6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms