Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Cdkl5Q3UTQ8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Cdkl5Q3UTQ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.38■■□□□ 1.97
Cdkl5Q3UTQ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cdkl5Q3UTQ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Cdkl5Q3UTQ8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cdkl5Q3UTQ8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cdkl5Q3UTQ8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cdkl5Q3UTQ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.34■■□□□ 1.97
Cdkl5Q3UTQ8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cdkl5Q3UTQ8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cdkl5Q3UTQ8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.33■■□□□ 1.97
Cdkl5Q3UTQ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Cdkl5Q3UTQ8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.31■■□□□ 1.96
Cdkl5Q3UTQ8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Cdkl5Q3UTQ8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cdkl5Q3UTQ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cdkl5Q3UTQ8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.3■■□□□ 1.96
Cdkl5Q3UTQ8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.28■■□□□ 1.96
Cdkl5Q3UTQ8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cdkl5Q3UTQ8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cdkl5Q3UTQ8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Cdkl5Q3UTQ8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cdkl5Q3UTQ8 Gm6821-201ENSMUST00000107540 542 ntBASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.25■■□□□ 1.95
Cdkl5Q3UTQ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Cdkl5Q3UTQ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cdkl5Q3UTQ8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Cdkl5Q3UTQ8 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.21■■□□□ 1.95
Cdkl5Q3UTQ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cdkl5Q3UTQ8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cdkl5Q3UTQ8 Particl-201ENSMUST00000205370 1560 ntBASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cdkl5Q3UTQ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cdkl5Q3UTQ8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.17■■□□□ 1.94
Cdkl5Q3UTQ8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cdkl5Q3UTQ8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Cdkl5Q3UTQ8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cdkl5Q3UTQ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Cdkl5Q3UTQ8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Cdkl5Q3UTQ8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Cdkl5Q3UTQ8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Cdkl5Q3UTQ8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.13■■□□□ 1.93
Cdkl5Q3UTQ8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Cdkl5Q3UTQ8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Gm8503-201ENSMUST00000118131 455 ntBASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cdkl5Q3UTQ8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Cdkl5Q3UTQ8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Cdkl5Q3UTQ8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cdkl5Q3UTQ8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.08■■□□□ 1.93
Cdkl5Q3UTQ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Cdkl5Q3UTQ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.08■■□□□ 1.93
Cdkl5Q3UTQ8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Cdkl5Q3UTQ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Cdkl5Q3UTQ8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cdkl5Q3UTQ8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Cdkl5Q3UTQ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cdkl5Q3UTQ8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.05■■□□□ 1.92
Cdkl5Q3UTQ8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cdkl5Q3UTQ8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cdkl5Q3UTQ8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Cdkl5Q3UTQ8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Cdkl5Q3UTQ8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.02■■□□□ 1.92
Cdkl5Q3UTQ8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cdkl5Q3UTQ8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms