Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Naf1Q3UMQ8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Naf1Q3UMQ8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Naf1Q3UMQ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.12■■□□□ 1.45
Naf1Q3UMQ8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.11■■□□□ 1.45
Naf1Q3UMQ8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Naf1Q3UMQ8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.1■■□□□ 1.45
Naf1Q3UMQ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Naf1Q3UMQ8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.09■■□□□ 1.45
Naf1Q3UMQ8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Naf1Q3UMQ8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Naf1Q3UMQ8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Naf1Q3UMQ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Naf1Q3UMQ8 Amer2-203ENSMUST00000225247 2662 ntBASIC24.07■■□□□ 1.44
Naf1Q3UMQ8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Naf1Q3UMQ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Naf1Q3UMQ8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Naf1Q3UMQ8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Naf1Q3UMQ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Naf1Q3UMQ8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Naf1Q3UMQ8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Naf1Q3UMQ8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Naf1Q3UMQ8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.03■■□□□ 1.44
Naf1Q3UMQ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
Naf1Q3UMQ8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Naf1Q3UMQ8 Gm11175-201ENSMUST00000116172 543 ntBASIC24.01■■□□□ 1.43
Naf1Q3UMQ8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Naf1Q3UMQ8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Naf1Q3UMQ8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24■■□□□ 1.43
Naf1Q3UMQ8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Naf1Q3UMQ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Naf1Q3UMQ8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Naf1Q3UMQ8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Naf1Q3UMQ8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
Naf1Q3UMQ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Naf1Q3UMQ8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Naf1Q3UMQ8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Naf1Q3UMQ8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Naf1Q3UMQ8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.95■■□□□ 1.42
Naf1Q3UMQ8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Naf1Q3UMQ8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Naf1Q3UMQ8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Naf1Q3UMQ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Naf1Q3UMQ8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Naf1Q3UMQ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Naf1Q3UMQ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Naf1Q3UMQ8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Naf1Q3UMQ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Naf1Q3UMQ8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.92■■□□□ 1.42
Naf1Q3UMQ8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Gm37136-201ENSMUST00000194368 194 ntBASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Gm6311-201ENSMUST00000073790 878 ntBASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Naf1Q3UMQ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Naf1Q3UMQ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Naf1Q3UMQ8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Naf1Q3UMQ8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.89■■□□□ 1.41
Naf1Q3UMQ8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.89■■□□□ 1.41
Naf1Q3UMQ8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Naf1Q3UMQ8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Naf1Q3UMQ8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Naf1Q3UMQ8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Naf1Q3UMQ8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Naf1Q3UMQ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Naf1Q3UMQ8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Naf1Q3UMQ8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.86■■□□□ 1.41
Naf1Q3UMQ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.85■■□□□ 1.41
Naf1Q3UMQ8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Naf1Q3UMQ8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.85■■□□□ 1.41
Naf1Q3UMQ8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.84■■□□□ 1.41
Naf1Q3UMQ8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Naf1Q3UMQ8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Naf1Q3UMQ8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Naf1Q3UMQ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Naf1Q3UMQ8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Naf1Q3UMQ8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Naf1Q3UMQ8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Naf1Q3UMQ8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Naf1Q3UMQ8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Naf1Q3UMQ8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Naf1Q3UMQ8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Naf1Q3UMQ8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Naf1Q3UMQ8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Naf1Q3UMQ8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Naf1Q3UMQ8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Naf1Q3UMQ8 Mir6538-201ENSMUST00000183713 110 ntBASIC23.79■■□□□ 1.4
Naf1Q3UMQ8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Naf1Q3UMQ8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Naf1Q3UMQ8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Naf1Q3UMQ8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Naf1Q3UMQ8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Naf1Q3UMQ8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Naf1Q3UMQ8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Naf1Q3UMQ8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Naf1Q3UMQ8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms