Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem88bQ3TYP4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem88bQ3TYP4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tmem88bQ3TYP4 Gm7332-201ENSMUST00000118351 454 ntBASIC19.67■□□□□ 0.74
Tmem88bQ3TYP4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.67■□□□□ 0.74
Tmem88bQ3TYP4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmem88bQ3TYP4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmem88bQ3TYP4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Tmem88bQ3TYP4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmem88bQ3TYP4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmem88bQ3TYP4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.65■□□□□ 0.74
Tmem88bQ3TYP4 Mir3960-201ENSMUST00000198213 73 ntBASIC19.65■□□□□ 0.74
Tmem88bQ3TYP4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tmem88bQ3TYP4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tmem88bQ3TYP4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.64■□□□□ 0.73
Tmem88bQ3TYP4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tmem88bQ3TYP4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tmem88bQ3TYP4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tmem88bQ3TYP4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tmem88bQ3TYP4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmem88bQ3TYP4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tmem88bQ3TYP4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tmem88bQ3TYP4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem88bQ3TYP4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem88bQ3TYP4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.62■□□□□ 0.73
Tmem88bQ3TYP4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem88bQ3TYP4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tmem88bQ3TYP4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem88bQ3TYP4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem88bQ3TYP4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tmem88bQ3TYP4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem88bQ3TYP4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.6■□□□□ 0.73
Tmem88bQ3TYP4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tmem88bQ3TYP4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tmem88bQ3TYP4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
Tmem88bQ3TYP4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tmem88bQ3TYP4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tmem88bQ3TYP4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tmem88bQ3TYP4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem88bQ3TYP4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmem88bQ3TYP4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem88bQ3TYP4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem88bQ3TYP4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem88bQ3TYP4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem88bQ3TYP4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tmem88bQ3TYP4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmem88bQ3TYP4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.55■□□□□ 0.72
Tmem88bQ3TYP4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Tmem88bQ3TYP4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem88bQ3TYP4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem88bQ3TYP4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem88bQ3TYP4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem88bQ3TYP4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmem88bQ3TYP4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem88bQ3TYP4 Gm45364-201ENSMUST00000210883 159 ntBASIC19.52■□□□□ 0.72
Tmem88bQ3TYP4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tmem88bQ3TYP4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.51■□□□□ 0.71
Tmem88bQ3TYP4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem88bQ3TYP4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem88bQ3TYP4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem88bQ3TYP4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tmem88bQ3TYP4 Gm27502-201ENSMUST00000183495 199 ntBASIC19.5■□□□□ 0.71
Tmem88bQ3TYP4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem88bQ3TYP4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tmem88bQ3TYP4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tmem88bQ3TYP4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem88bQ3TYP4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem88bQ3TYP4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tmem88bQ3TYP4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tmem88bQ3TYP4 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.47■□□□□ 0.71
Tmem88bQ3TYP4 Gm15039-201ENSMUST00000118914 875 ntBASIC19.47■□□□□ 0.71
Tmem88bQ3TYP4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tmem88bQ3TYP4 Gm14523-201ENSMUST00000117260 558 ntBASIC19.46■□□□□ 0.71
Tmem88bQ3TYP4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tmem88bQ3TYP4 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.46■□□□□ 0.71
Tmem88bQ3TYP4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem88bQ3TYP4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.45■□□□□ 0.7
Tmem88bQ3TYP4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem88bQ3TYP4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tmem88bQ3TYP4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Gm37136-201ENSMUST00000194368 194 ntBASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tmem88bQ3TYP4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem88bQ3TYP4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tmem88bQ3TYP4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem88bQ3TYP4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.42■□□□□ 0.7
Tmem88bQ3TYP4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem88bQ3TYP4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms