Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrfn1Q2WF71 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrfn1Q2WF71 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrfn1Q2WF71 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrfn1Q2WF71 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrfn1Q2WF71 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lrfn1Q2WF71 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrfn1Q2WF71 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lrfn1Q2WF71 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Lrfn1Q2WF71 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrfn1Q2WF71 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lrfn1Q2WF71 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrfn1Q2WF71 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrfn1Q2WF71 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lrfn1Q2WF71 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrfn1Q2WF71 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.4■■□□□ 1.02
Lrfn1Q2WF71 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrfn1Q2WF71 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrfn1Q2WF71 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lrfn1Q2WF71 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Lrfn1Q2WF71 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrfn1Q2WF71 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrfn1Q2WF71 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrfn1Q2WF71 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrfn1Q2WF71 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrfn1Q2WF71 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrfn1Q2WF71 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lrfn1Q2WF71 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Lrfn1Q2WF71 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lrfn1Q2WF71 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrfn1Q2WF71 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.36■■□□□ 1.01
Lrfn1Q2WF71 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.35■■□□□ 1.01
Lrfn1Q2WF71 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrfn1Q2WF71 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrfn1Q2WF71 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Lrfn1Q2WF71 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Lrfn1Q2WF71 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lrfn1Q2WF71 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrfn1Q2WF71 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Lrfn1Q2WF71 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Lrfn1Q2WF71 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.33■■□□□ 1
Lrfn1Q2WF71 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lrfn1Q2WF71 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lrfn1Q2WF71 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.32■■□□□ 1
Lrfn1Q2WF71 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrfn1Q2WF71 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Lrfn1Q2WF71 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrfn1Q2WF71 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lrfn1Q2WF71 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrfn1Q2WF71 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Lrfn1Q2WF71 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrfn1Q2WF71 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrfn1Q2WF71 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lrfn1Q2WF71 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lrfn1Q2WF71 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrfn1Q2WF71 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Lrfn1Q2WF71 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrfn1Q2WF71 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Lrfn1Q2WF71 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.29■■□□□ 1
Lrfn1Q2WF71 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Lrfn1Q2WF71 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.29■■□□□ 1
Lrfn1Q2WF71 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lrfn1Q2WF71 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrfn1Q2WF71 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrfn1Q2WF71 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrfn1Q2WF71 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrfn1Q2WF71 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrfn1Q2WF71 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Lrfn1Q2WF71 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Lrfn1Q2WF71 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrfn1Q2WF71 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrfn1Q2WF71 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lrfn1Q2WF71 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lrfn1Q2WF71 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Lrfn1Q2WF71 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn1Q2WF71 Gm45855-201ENSMUST00000212546 880 ntBASIC21.23■□□□□ 0.99
Lrfn1Q2WF71 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrfn1Q2WF71 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrfn1Q2WF71 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.22■□□□□ 0.99
Lrfn1Q2WF71 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.22■□□□□ 0.99
Lrfn1Q2WF71 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrfn1Q2WF71 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrfn1Q2WF71 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Lrfn1Q2WF71 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.2■□□□□ 0.99
Lrfn1Q2WF71 Gm9397-201ENSMUST00000200125 605 ntBASIC21.2■□□□□ 0.98
Lrfn1Q2WF71 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrfn1Q2WF71 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrfn1Q2WF71 Notumos-201ENSMUST00000151998 2659 ntBASIC21.19■□□□□ 0.98
Lrfn1Q2WF71 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn1Q2WF71 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn1Q2WF71 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn1Q2WF71 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrfn1Q2WF71 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn1Q2WF71 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.18■□□□□ 0.98
Lrfn1Q2WF71 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn1Q2WF71 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn1Q2WF71 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn1Q2WF71 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.18■□□□□ 0.98
Lrfn1Q2WF71 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrfn1Q2WF71 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms