Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smn1P97801 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.08■□□□□ 0.8
Smn1P97801 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smn1P97801 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Smn1P97801 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smn1P97801 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.07■□□□□ 0.8
Smn1P97801 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Smn1P97801 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smn1P97801 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smn1P97801 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smn1P97801 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smn1P97801 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smn1P97801 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smn1P97801 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smn1P97801 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smn1P97801 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Smn1P97801 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smn1P97801 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smn1P97801 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smn1P97801 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smn1P97801 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Smn1P97801 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smn1P97801 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smn1P97801 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smn1P97801 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smn1P97801 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smn1P97801 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.01■□□□□ 0.79
Smn1P97801 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smn1P97801 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smn1P97801 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Smn1P97801 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smn1P97801 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smn1P97801 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smn1P97801 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smn1P97801 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smn1P97801 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smn1P97801 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.99■□□□□ 0.79
Smn1P97801 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smn1P97801 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Smn1P97801 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smn1P97801 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smn1P97801 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smn1P97801 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smn1P97801 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smn1P97801 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smn1P97801 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smn1P97801 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smn1P97801 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.97■□□□□ 0.79
Smn1P97801 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smn1P97801 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Smn1P97801 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smn1P97801 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smn1P97801 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smn1P97801 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.96■□□□□ 0.79
Smn1P97801 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.96■□□□□ 0.79
Smn1P97801 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smn1P97801 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smn1P97801 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smn1P97801 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smn1P97801 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.95■□□□□ 0.78
Smn1P97801 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smn1P97801 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smn1P97801 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smn1P97801 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smn1P97801 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smn1P97801 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smn1P97801 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smn1P97801 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smn1P97801 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smn1P97801 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smn1P97801 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smn1P97801 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smn1P97801 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smn1P97801 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smn1P97801 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smn1P97801 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smn1P97801 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smn1P97801 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smn1P97801 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Smn1P97801 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smn1P97801 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Smn1P97801 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smn1P97801 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.9■□□□□ 0.78
Smn1P97801 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smn1P97801 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smn1P97801 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smn1P97801 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smn1P97801 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Smn1P97801 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smn1P97801 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smn1P97801 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Smn1P97801 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smn1P97801 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smn1P97801 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smn1P97801 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smn1P97801 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smn1P97801 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smn1P97801 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smn1P97801 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smn1P97801 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms