Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gfra1P97785 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.47■□□□□ 0.71
Gfra1P97785 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfra1P97785 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfra1P97785 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.45■□□□□ 0.7
Gfra1P97785 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfra1P97785 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfra1P97785 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Gfra1P97785 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfra1P97785 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfra1P97785 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.43■□□□□ 0.7
Gfra1P97785 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gfra1P97785 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gfra1P97785 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfra1P97785 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfra1P97785 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfra1P97785 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gfra1P97785 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.4■□□□□ 0.7
Gfra1P97785 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfra1P97785 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfra1P97785 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfra1P97785 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gfra1P97785 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gfra1P97785 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfra1P97785 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gfra1P97785 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfra1P97785 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gfra1P97785 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gfra1P97785 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra1P97785 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra1P97785 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.36■□□□□ 0.69
Gfra1P97785 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra1P97785 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gfra1P97785 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.35■□□□□ 0.69
Gfra1P97785 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gfra1P97785 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gfra1P97785 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.34■□□□□ 0.69
Gfra1P97785 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gfra1P97785 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gfra1P97785 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gfra1P97785 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Gfra1P97785 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.32■□□□□ 0.68
Gfra1P97785 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gfra1P97785 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfra1P97785 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfra1P97785 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Gfra1P97785 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gfra1P97785 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfra1P97785 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gfra1P97785 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gfra1P97785 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gfra1P97785 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gfra1P97785 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gfra1P97785 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gfra1P97785 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra1P97785 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.28■□□□□ 0.68
Gfra1P97785 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra1P97785 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfra1P97785 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Gfra1P97785 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gfra1P97785 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.27■□□□□ 0.68
Gfra1P97785 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfra1P97785 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfra1P97785 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.25■□□□□ 0.67
Gfra1P97785 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfra1P97785 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfra1P97785 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfra1P97785 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.24■□□□□ 0.67
Gfra1P97785 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gfra1P97785 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.24■□□□□ 0.67
Gfra1P97785 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gfra1P97785 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfra1P97785 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfra1P97785 Gm6311-201ENSMUST00000073790 878 ntBASIC19.23■□□□□ 0.67
Gfra1P97785 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gfra1P97785 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gfra1P97785 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gfra1P97785 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra1P97785 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra1P97785 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra1P97785 Gm37136-201ENSMUST00000194368 194 ntBASIC19.2■□□□□ 0.66
Gfra1P97785 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfra1P97785 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra1P97785 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.19■□□□□ 0.66
Gfra1P97785 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gfra1P97785 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.19■□□□□ 0.66
Gfra1P97785 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gfra1P97785 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gfra1P97785 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gfra1P97785 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gfra1P97785 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.17■□□□□ 0.66
Gfra1P97785 Gm4799-201ENSMUST00000095396 657 ntBASIC19.17■□□□□ 0.66
Gfra1P97785 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gfra1P97785 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gfra1P97785 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gfra1P97785 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.16■□□□□ 0.66
Gfra1P97785 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Gfra1P97785 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Gfra1P97785 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gfra1P97785 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms