Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SgcbP82349 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SgcbP82349 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SgcbP82349 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SgcbP82349 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21■□□□□ 0.95
SgcbP82349 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SgcbP82349 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SgcbP82349 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcbP82349 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SgcbP82349 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SgcbP82349 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcbP82349 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcbP82349 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SgcbP82349 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SgcbP82349 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.97■□□□□ 0.95
SgcbP82349 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.97■□□□□ 0.95
SgcbP82349 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SgcbP82349 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SgcbP82349 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SgcbP82349 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.96■□□□□ 0.95
SgcbP82349 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcbP82349 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SgcbP82349 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.95■□□□□ 0.94
SgcbP82349 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcbP82349 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SgcbP82349 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SgcbP82349 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SgcbP82349 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SgcbP82349 Particl-201ENSMUST00000205370 1560 ntBASIC20.93■□□□□ 0.94
SgcbP82349 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
SgcbP82349 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.93■□□□□ 0.94
SgcbP82349 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SgcbP82349 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SgcbP82349 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgcbP82349 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgcbP82349 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SgcbP82349 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgcbP82349 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.91■□□□□ 0.94
SgcbP82349 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.91■□□□□ 0.94
SgcbP82349 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.91■□□□□ 0.94
SgcbP82349 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgcbP82349 Gm11599-201ENSMUST00000118720 878 ntBASIC20.9■□□□□ 0.94
SgcbP82349 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SgcbP82349 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SgcbP82349 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.89■□□□□ 0.93
SgcbP82349 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.89■□□□□ 0.93
SgcbP82349 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcbP82349 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcbP82349 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcbP82349 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcbP82349 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcbP82349 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcbP82349 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcbP82349 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcbP82349 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SgcbP82349 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.85■□□□□ 0.93
SgcbP82349 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SgcbP82349 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SgcbP82349 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgcbP82349 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SgcbP82349 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgcbP82349 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.84■□□□□ 0.93
SgcbP82349 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.84■□□□□ 0.93
SgcbP82349 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SgcbP82349 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SgcbP82349 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgcbP82349 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SgcbP82349 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SgcbP82349 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SgcbP82349 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SgcbP82349 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
SgcbP82349 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SgcbP82349 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.78■□□□□ 0.92
SgcbP82349 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.78■□□□□ 0.92
SgcbP82349 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SgcbP82349 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SgcbP82349 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SgcbP82349 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SgcbP82349 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.76■□□□□ 0.91
SgcbP82349 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SgcbP82349 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcbP82349 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SgcbP82349 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcbP82349 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcbP82349 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgcbP82349 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.74■□□□□ 0.91
SgcbP82349 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SgcbP82349 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcbP82349 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgcbP82349 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SgcbP82349 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SgcbP82349 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SgcbP82349 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgcbP82349 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SgcbP82349 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.7■□□□□ 0.9
SgcbP82349 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcbP82349 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcbP82349 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcbP82349 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SgcbP82349 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms