Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.25■□□□□ 0.83
Usp9xP70398 Gm27502-201ENSMUST00000183495 199 ntBASIC20.25■□□□□ 0.83
Usp9xP70398 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp9xP70398 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.24■□□□□ 0.83
Usp9xP70398 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp9xP70398 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp9xP70398 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp9xP70398 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp9xP70398 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp9xP70398 Gm5921-201ENSMUST00000075898 882 ntBASIC20.22■□□□□ 0.83
Usp9xP70398 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp9xP70398 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp9xP70398 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp9xP70398 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp9xP70398 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp9xP70398 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Usp9xP70398 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.19■□□□□ 0.82
Usp9xP70398 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp9xP70398 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp9xP70398 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp9xP70398 Gm10420-201ENSMUST00000121713 882 ntBASIC20.16■□□□□ 0.82
Usp9xP70398 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp9xP70398 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp9xP70398 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp9xP70398 Gm30023-201ENSMUST00000197970 889 ntBASIC20.16■□□□□ 0.82
Usp9xP70398 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp9xP70398 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.15■□□□□ 0.82
Usp9xP70398 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp9xP70398 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Usp9xP70398 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp9xP70398 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp9xP70398 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp9xP70398 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp9xP70398 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp9xP70398 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp9xP70398 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp9xP70398 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.11■□□□□ 0.81
Usp9xP70398 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Usp9xP70398 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp9xP70398 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp9xP70398 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Usp9xP70398 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp9xP70398 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.09■□□□□ 0.81
Usp9xP70398 Mir3960-201ENSMUST00000198213 73 ntBASIC20.09■□□□□ 0.81
Usp9xP70398 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.08■□□□□ 0.8
Usp9xP70398 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp9xP70398 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp9xP70398 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp9xP70398 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp9xP70398 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp9xP70398 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp9xP70398 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp9xP70398 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp9xP70398 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp9xP70398 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp9xP70398 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp9xP70398 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Usp9xP70398 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.04■□□□□ 0.8
Usp9xP70398 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Usp9xP70398 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp9xP70398 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.03■□□□□ 0.8
Usp9xP70398 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp9xP70398 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp9xP70398 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.01■□□□□ 0.79
Usp9xP70398 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
Usp9xP70398 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp9xP70398 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Usp9xP70398 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp9xP70398 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp9xP70398 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp9xP70398 Pcf11-205ENSMUST00000208255 1720 ntBASIC20■□□□□ 0.79
Usp9xP70398 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp9xP70398 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Usp9xP70398 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20■□□□□ 0.79
Usp9xP70398 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp9xP70398 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Usp9xP70398 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.99■□□□□ 0.79
Usp9xP70398 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp9xP70398 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp9xP70398 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Usp9xP70398 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Usp9xP70398 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp9xP70398 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Usp9xP70398 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.96■□□□□ 0.79
Usp9xP70398 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp9xP70398 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp9xP70398 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp9xP70398 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp9xP70398 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Usp9xP70398 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.95■□□□□ 0.78
Usp9xP70398 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp9xP70398 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp9xP70398 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp9xP70398 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.94■□□□□ 0.78
Usp9xP70398 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.94■□□□□ 0.78
Usp9xP70398 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp9xP70398 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp9xP70398 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.93■□□□□ 0.78
Usp9xP70398 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.93■□□□□ 0.78
Usp9xP70398 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms