Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Lsm6P62313 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm6P62313 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm6P62313 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm6P62313 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lsm6P62313 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm6P62313 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm6P62313 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.66■□□□□ 0.9
Lsm6P62313 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm6P62313 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm6P62313 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm6P62313 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm6P62313 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Lsm6P62313 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Lsm6P62313 Nkain2-201ENSMUST00000092602 558 ntBASIC20.65■□□□□ 0.9
Lsm6P62313 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Lsm6P62313 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.64■□□□□ 0.89
Lsm6P62313 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm6P62313 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm6P62313 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm6P62313 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm6P62313 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm6P62313 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm6P62313 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm6P62313 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm6P62313 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Lsm6P62313 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Lsm6P62313 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.6■□□□□ 0.89
Lsm6P62313 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.59■□□□□ 0.89
Lsm6P62313 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm6P62313 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.59■□□□□ 0.89
Lsm6P62313 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lsm6P62313 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Lsm6P62313 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm6P62313 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.58■□□□□ 0.89
Lsm6P62313 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm6P62313 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Lsm6P62313 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm6P62313 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm6P62313 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.56■□□□□ 0.88
Lsm6P62313 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.56■□□□□ 0.88
Lsm6P62313 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm6P62313 Particl-201ENSMUST00000205370 1560 ntBASIC20.56■□□□□ 0.88
Lsm6P62313 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm6P62313 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lsm6P62313 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.56■□□□□ 0.88
Lsm6P62313 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Lsm6P62313 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm6P62313 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm6P62313 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Lsm6P62313 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lsm6P62313 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm6P62313 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.55■□□□□ 0.88
Lsm6P62313 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.54■□□□□ 0.88
Lsm6P62313 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm6P62313 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm6P62313 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm6P62313 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.54■□□□□ 0.88
Lsm6P62313 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm6P62313 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lsm6P62313 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Lsm6P62313 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm6P62313 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.52■□□□□ 0.88
Lsm6P62313 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lsm6P62313 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.51■□□□□ 0.87
Lsm6P62313 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm6P62313 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.51■□□□□ 0.87
Lsm6P62313 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm6P62313 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.5■□□□□ 0.87
Lsm6P62313 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Lsm6P62313 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm6P62313 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Lsm6P62313 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm6P62313 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm6P62313 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.49■□□□□ 0.87
Lsm6P62313 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm6P62313 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm6P62313 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm6P62313 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Lsm6P62313 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm6P62313 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.48■□□□□ 0.87
Lsm6P62313 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm6P62313 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm6P62313 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm6P62313 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm6P62313 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm6P62313 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm6P62313 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm6P62313 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm6P62313 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Lsm6P62313 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm6P62313 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lsm6P62313 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm6P62313 Gm6821-201ENSMUST00000107540 542 ntBASIC20.42■□□□□ 0.86
Lsm6P62313 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm6P62313 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.42■□□□□ 0.86
Lsm6P62313 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.42■□□□□ 0.86
Lsm6P62313 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.42■□□□□ 0.86
Lsm6P62313 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm6P62313 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms