Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Mmp20P57748 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Mmp20P57748 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Mmp20P57748 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Mmp20P57748 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Mmp20P57748 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.69■■■□□ 2.02
Mmp20P57748 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Mmp20P57748 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Mmp20P57748 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.68■■■□□ 2.02
Mmp20P57748 Gm16437-201ENSMUST00000025669 507 ntBASIC27.68■■■□□ 2.02
Mmp20P57748 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.68■■■□□ 2.02
Mmp20P57748 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Mmp20P57748 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.65■■■□□ 2.02
Mmp20P57748 Gm12366-201ENSMUST00000121722 873 ntBASIC27.65■■■□□ 2.02
Mmp20P57748 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.65■■■□□ 2.02
Mmp20P57748 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.65■■■□□ 2.02
Mmp20P57748 Mir3960-201ENSMUST00000198213 73 ntBASIC27.65■■■□□ 2.02
Mmp20P57748 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.65■■■□□ 2.02
Mmp20P57748 Gm5786-201ENSMUST00000085368 882 ntBASIC27.65■■■□□ 2.02
Mmp20P57748 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Mmp20P57748 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.63■■■□□ 2.01
Mmp20P57748 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.63■■■□□ 2.01
Mmp20P57748 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Mmp20P57748 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Mmp20P57748 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Mmp20P57748 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Mmp20P57748 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Mmp20P57748 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Mmp20P57748 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Mmp20P57748 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Mmp20P57748 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Mmp20P57748 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.6■■■□□ 2.01
Mmp20P57748 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.6■■■□□ 2.01
Mmp20P57748 Gm45364-201ENSMUST00000210883 159 ntBASIC27.6■■■□□ 2.01
Mmp20P57748 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Mmp20P57748 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Mmp20P57748 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.59■■■□□ 2.01
Mmp20P57748 Gm37136-201ENSMUST00000194368 194 ntBASIC27.59■■■□□ 2.01
Mmp20P57748 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Mmp20P57748 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Mmp20P57748 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Mmp20P57748 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.57■■■□□ 2
Mmp20P57748 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.57■■■□□ 2
Mmp20P57748 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.55■■■□□ 2
Mmp20P57748 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.55■■■□□ 2
Mmp20P57748 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.55■■■□□ 2
Mmp20P57748 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.54■■■□□ 2
Mmp20P57748 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
Mmp20P57748 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.53■■■□□ 2
Mmp20P57748 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.53■■■□□ 2
Mmp20P57748 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.52■■■□□ 2
Mmp20P57748 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Mmp20P57748 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Mmp20P57748 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Mmp20P57748 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Mmp20P57748 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Mmp20P57748 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Mmp20P57748 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Mmp20P57748 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Mmp20P57748 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Mmp20P57748 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.48■■□□□ 1.99
Mmp20P57748 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp20P57748 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp20P57748 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp20P57748 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp20P57748 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.48■■□□□ 1.99
Mmp20P57748 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Mmp20P57748 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Mmp20P57748 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Mmp20P57748 Gm27502-201ENSMUST00000183495 199 ntBASIC27.45■■□□□ 1.98
Mmp20P57748 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Mmp20P57748 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Mmp20P57748 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
Mmp20P57748 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.44■■□□□ 1.98
Mmp20P57748 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.44■■□□□ 1.98
Mmp20P57748 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Mmp20P57748 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Mmp20P57748 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mmp20P57748 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.42■■□□□ 1.98
Mmp20P57748 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Mmp20P57748 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Mmp20P57748 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.41■■□□□ 1.98
Mmp20P57748 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Mmp20P57748 Gm7332-201ENSMUST00000118351 454 ntBASIC27.4■■□□□ 1.98
Mmp20P57748 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Mmp20P57748 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Mmp20P57748 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Mmp20P57748 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.39■■□□□ 1.98
Mmp20P57748 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Mmp20P57748 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.39■■□□□ 1.98
Mmp20P57748 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Mmp20P57748 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp20P57748 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp20P57748 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp20P57748 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Mmp20P57748 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.36■■□□□ 1.97
Mmp20P57748 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Mmp20P57748 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
Mmp20P57748 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Mmp20P57748 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms