Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
SmoP56726 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SmoP56726 Particl-201ENSMUST00000205370 1560 ntBASIC24.02■■□□□ 1.44
SmoP56726 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
SmoP56726 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.01■■□□□ 1.43
SmoP56726 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SmoP56726 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SmoP56726 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.97■■□□□ 1.43
SmoP56726 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SmoP56726 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SmoP56726 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.96■■□□□ 1.43
SmoP56726 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SmoP56726 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SmoP56726 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
SmoP56726 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SmoP56726 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SmoP56726 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.93■■□□□ 1.42
SmoP56726 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SmoP56726 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.92■■□□□ 1.42
SmoP56726 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SmoP56726 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SmoP56726 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.88■■□□□ 1.41
SmoP56726 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SmoP56726 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SmoP56726 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.87■■□□□ 1.41
SmoP56726 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.87■■□□□ 1.41
SmoP56726 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SmoP56726 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SmoP56726 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SmoP56726 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SmoP56726 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SmoP56726 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SmoP56726 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SmoP56726 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SmoP56726 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.81■■□□□ 1.4
SmoP56726 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SmoP56726 Gm37136-201ENSMUST00000194368 194 ntBASIC23.8■■□□□ 1.4
SmoP56726 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SmoP56726 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.79■■□□□ 1.4
SmoP56726 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SmoP56726 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SmoP56726 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SmoP56726 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SmoP56726 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SmoP56726 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SmoP56726 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SmoP56726 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SmoP56726 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SmoP56726 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SmoP56726 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SmoP56726 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SmoP56726 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SmoP56726 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SmoP56726 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SmoP56726 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SmoP56726 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SmoP56726 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SmoP56726 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SmoP56726 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SmoP56726 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.72■■□□□ 1.39
SmoP56726 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SmoP56726 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.71■■□□□ 1.39
SmoP56726 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SmoP56726 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.7■■□□□ 1.38
SmoP56726 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.69■■□□□ 1.38
SmoP56726 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.69■■□□□ 1.38
SmoP56726 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SmoP56726 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SmoP56726 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SmoP56726 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.67■■□□□ 1.38
SmoP56726 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.66■■□□□ 1.38
SmoP56726 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.66■■□□□ 1.38
SmoP56726 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SmoP56726 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SmoP56726 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.65■■□□□ 1.38
SmoP56726 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SmoP56726 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
SmoP56726 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SmoP56726 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SmoP56726 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SmoP56726 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SmoP56726 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SmoP56726 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SmoP56726 Gm4799-201ENSMUST00000095396 657 ntBASIC23.62■■□□□ 1.37
SmoP56726 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SmoP56726 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.61■■□□□ 1.37
SmoP56726 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SmoP56726 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SmoP56726 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SmoP56726 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SmoP56726 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SmoP56726 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SmoP56726 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.59■■□□□ 1.37
SmoP56726 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SmoP56726 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SmoP56726 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SmoP56726 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.58■■□□□ 1.37
SmoP56726 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SmoP56726 Gm6311-201ENSMUST00000073790 878 ntBASIC23.58■■□□□ 1.37
SmoP56726 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms