Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccr4P51680 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr4P51680 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ccr4P51680 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr4P51680 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccr4P51680 Gm30023-201ENSMUST00000197970 889 ntBASIC21.66■■□□□ 1.06
Ccr4P51680 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr4P51680 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.65■■□□□ 1.06
Ccr4P51680 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr4P51680 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccr4P51680 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr4P51680 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccr4P51680 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Ccr4P51680 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.64■■□□□ 1.05
Ccr4P51680 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr4P51680 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ccr4P51680 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr4P51680 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr4P51680 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ccr4P51680 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr4P51680 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ccr4P51680 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr4P51680 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr4P51680 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccr4P51680 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccr4P51680 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccr4P51680 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.62■■□□□ 1.05
Ccr4P51680 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccr4P51680 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr4P51680 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr4P51680 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr4P51680 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccr4P51680 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccr4P51680 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccr4P51680 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccr4P51680 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccr4P51680 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr4P51680 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccr4P51680 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.58■■□□□ 1.05
Ccr4P51680 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr4P51680 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr4P51680 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr4P51680 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr4P51680 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccr4P51680 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccr4P51680 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ccr4P51680 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccr4P51680 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.56■■□□□ 1.04
Ccr4P51680 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccr4P51680 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ccr4P51680 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.55■■□□□ 1.04
Ccr4P51680 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ccr4P51680 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccr4P51680 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccr4P51680 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ccr4P51680 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
Ccr4P51680 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccr4P51680 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.54■■□□□ 1.04
Ccr4P51680 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccr4P51680 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccr4P51680 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccr4P51680 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccr4P51680 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.54■■□□□ 1.04
Ccr4P51680 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ccr4P51680 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.53■■□□□ 1.04
Ccr4P51680 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
Ccr4P51680 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccr4P51680 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Ccr4P51680 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccr4P51680 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccr4P51680 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccr4P51680 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccr4P51680 Nkain2-201ENSMUST00000092602 558 ntBASIC21.5■■□□□ 1.03
Ccr4P51680 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccr4P51680 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccr4P51680 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ccr4P51680 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
Ccr4P51680 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.48■■□□□ 1.03
Ccr4P51680 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.48■■□□□ 1.03
Ccr4P51680 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccr4P51680 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccr4P51680 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccr4P51680 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccr4P51680 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ccr4P51680 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ccr4P51680 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ccr4P51680 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.47■■□□□ 1.03
Ccr4P51680 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ccr4P51680 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccr4P51680 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.46■■□□□ 1.03
Ccr4P51680 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccr4P51680 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccr4P51680 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccr4P51680 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccr4P51680 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccr4P51680 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr4P51680 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ccr4P51680 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccr4P51680 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ccr4P51680 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms