Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a1P31648 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.11■□□□□ 0.81
Slc6a1P31648 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a1P31648 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.11■□□□□ 0.81
Slc6a1P31648 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a1P31648 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a1P31648 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a1P31648 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a1P31648 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a1P31648 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a1P31648 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc6a1P31648 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a1P31648 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a1P31648 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Slc6a1P31648 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc6a1P31648 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc6a1P31648 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a1P31648 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a1P31648 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a1P31648 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a1P31648 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a1P31648 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a1P31648 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.08■□□□□ 0.8
Slc6a1P31648 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a1P31648 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc6a1P31648 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.07■□□□□ 0.8
Slc6a1P31648 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a1P31648 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a1P31648 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a1P31648 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a1P31648 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a1P31648 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Slc6a1P31648 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Slc6a1P31648 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a1P31648 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a1P31648 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a1P31648 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc6a1P31648 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a1P31648 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.04■□□□□ 0.8
Slc6a1P31648 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a1P31648 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a1P31648 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a1P31648 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a1P31648 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.03■□□□□ 0.8
Slc6a1P31648 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a1P31648 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Slc6a1P31648 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Slc6a1P31648 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a1P31648 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a1P31648 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a1P31648 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.01■□□□□ 0.79
Slc6a1P31648 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a1P31648 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a1P31648 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a1P31648 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a1P31648 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a1P31648 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc6a1P31648 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20■□□□□ 0.79
Slc6a1P31648 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc6a1P31648 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc6a1P31648 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Slc6a1P31648 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a1P31648 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a1P31648 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a1P31648 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a1P31648 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc6a1P31648 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a1P31648 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Slc6a1P31648 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a1P31648 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc6a1P31648 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a1P31648 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Slc6a1P31648 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc6a1P31648 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc6a1P31648 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a1P31648 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a1P31648 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.96■□□□□ 0.79
Slc6a1P31648 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc6a1P31648 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a1P31648 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc6a1P31648 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Slc6a1P31648 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a1P31648 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Slc6a1P31648 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Slc6a1P31648 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a1P31648 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc6a1P31648 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a1P31648 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a1P31648 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Slc6a1P31648 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a1P31648 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a1P31648 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.92■□□□□ 0.78
Slc6a1P31648 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Slc6a1P31648 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a1P31648 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.92■□□□□ 0.78
Slc6a1P31648 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a1P31648 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Slc6a1P31648 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a1P31648 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Slc6a1P31648 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms