Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cd40P27512 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cd40P27512 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Cd40P27512 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Cd40P27512 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.45■■□□□ 1.02
Cd40P27512 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.45■■□□□ 1.02
Cd40P27512 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd40P27512 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.44■■□□□ 1.02
Cd40P27512 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd40P27512 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd40P27512 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cd40P27512 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd40P27512 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cd40P27512 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.42■■□□□ 1.02
Cd40P27512 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Cd40P27512 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd40P27512 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd40P27512 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.39■■□□□ 1.01
Cd40P27512 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd40P27512 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cd40P27512 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cd40P27512 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cd40P27512 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Cd40P27512 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cd40P27512 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cd40P27512 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cd40P27512 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cd40P27512 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.37■■□□□ 1.01
Cd40P27512 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cd40P27512 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cd40P27512 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cd40P27512 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd40P27512 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cd40P27512 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cd40P27512 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cd40P27512 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cd40P27512 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.32■■□□□ 1
Cd40P27512 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.32■■□□□ 1
Cd40P27512 Particl-201ENSMUST00000205370 1560 ntBASIC21.32■■□□□ 1
Cd40P27512 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Cd40P27512 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cd40P27512 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cd40P27512 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cd40P27512 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cd40P27512 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd40P27512 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd40P27512 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd40P27512 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cd40P27512 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cd40P27512 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd40P27512 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd40P27512 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cd40P27512 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cd40P27512 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cd40P27512 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cd40P27512 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cd40P27512 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd40P27512 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd40P27512 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cd40P27512 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd40P27512 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cd40P27512 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd40P27512 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cd40P27512 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd40P27512 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cd40P27512 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd40P27512 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.23■□□□□ 0.99
Cd40P27512 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.23■□□□□ 0.99
Cd40P27512 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd40P27512 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cd40P27512 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd40P27512 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.22■□□□□ 0.99
Cd40P27512 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd40P27512 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.21■□□□□ 0.99
Cd40P27512 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
Cd40P27512 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd40P27512 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cd40P27512 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.2■□□□□ 0.98
Cd40P27512 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cd40P27512 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd40P27512 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.19■□□□□ 0.98
Cd40P27512 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd40P27512 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd40P27512 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cd40P27512 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd40P27512 Gm37136-201ENSMUST00000194368 194 ntBASIC21.19■□□□□ 0.98
Cd40P27512 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.19■□□□□ 0.98
Cd40P27512 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd40P27512 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cd40P27512 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd40P27512 Gm7432-201ENSMUST00000210343 879 ntBASIC21.17■□□□□ 0.98
Cd40P27512 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd40P27512 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.17■□□□□ 0.98
Cd40P27512 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cd40P27512 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.16■□□□□ 0.98
Cd40P27512 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd40P27512 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.15■□□□□ 0.98
Cd40P27512 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd40P27512 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd40P27512 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms