Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col8a2P25318 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col8a2P25318 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col8a2P25318 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.87■□□□□ 0.77
Col8a2P25318 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col8a2P25318 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col8a2P25318 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.85■□□□□ 0.77
Col8a2P25318 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.85■□□□□ 0.77
Col8a2P25318 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col8a2P25318 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col8a2P25318 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col8a2P25318 Gm11599-201ENSMUST00000118720 878 ntBASIC19.83■□□□□ 0.77
Col8a2P25318 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col8a2P25318 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col8a2P25318 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col8a2P25318 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col8a2P25318 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.82■□□□□ 0.76
Col8a2P25318 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col8a2P25318 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col8a2P25318 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col8a2P25318 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col8a2P25318 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col8a2P25318 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col8a2P25318 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col8a2P25318 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col8a2P25318 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col8a2P25318 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col8a2P25318 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col8a2P25318 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col8a2P25318 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col8a2P25318 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col8a2P25318 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col8a2P25318 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Col8a2P25318 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Col8a2P25318 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col8a2P25318 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col8a2P25318 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col8a2P25318 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col8a2P25318 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col8a2P25318 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col8a2P25318 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col8a2P25318 Particl-201ENSMUST00000205370 1560 ntBASIC19.74■□□□□ 0.75
Col8a2P25318 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col8a2P25318 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col8a2P25318 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col8a2P25318 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.72■□□□□ 0.75
Col8a2P25318 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col8a2P25318 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.71■□□□□ 0.75
Col8a2P25318 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.71■□□□□ 0.75
Col8a2P25318 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col8a2P25318 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col8a2P25318 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col8a2P25318 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.7■□□□□ 0.74
Col8a2P25318 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col8a2P25318 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col8a2P25318 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col8a2P25318 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.67■□□□□ 0.74
Col8a2P25318 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.67■□□□□ 0.74
Col8a2P25318 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.67■□□□□ 0.74
Col8a2P25318 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col8a2P25318 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col8a2P25318 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col8a2P25318 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col8a2P25318 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col8a2P25318 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col8a2P25318 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col8a2P25318 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col8a2P25318 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Col8a2P25318 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col8a2P25318 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col8a2P25318 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col8a2P25318 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col8a2P25318 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.63■□□□□ 0.73
Col8a2P25318 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col8a2P25318 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col8a2P25318 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col8a2P25318 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col8a2P25318 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col8a2P25318 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.61■□□□□ 0.73
Col8a2P25318 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col8a2P25318 Gm11175-201ENSMUST00000116172 543 ntBASIC19.61■□□□□ 0.73
Col8a2P25318 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col8a2P25318 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.61■□□□□ 0.73
Col8a2P25318 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Col8a2P25318 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.6■□□□□ 0.73
Col8a2P25318 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col8a2P25318 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col8a2P25318 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.6■□□□□ 0.73
Col8a2P25318 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col8a2P25318 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col8a2P25318 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col8a2P25318 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col8a2P25318 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.59■□□□□ 0.73
Col8a2P25318 Gm37136-201ENSMUST00000194368 194 ntBASIC19.58■□□□□ 0.72
Col8a2P25318 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Col8a2P25318 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.58■□□□□ 0.72
Col8a2P25318 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col8a2P25318 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Col8a2P25318 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col8a2P25318 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms