Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxb2P0C1T1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxb2P0C1T1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxb2P0C1T1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxb2P0C1T1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxb2P0C1T1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
Hoxb2P0C1T1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hoxb2P0C1T1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxb2P0C1T1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxb2P0C1T1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxb2P0C1T1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Hoxb2P0C1T1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb2P0C1T1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxb2P0C1T1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Hoxb2P0C1T1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxb2P0C1T1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Hoxb2P0C1T1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb2P0C1T1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb2P0C1T1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxb2P0C1T1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hoxb2P0C1T1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxb2P0C1T1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Hoxb2P0C1T1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.58■□□□□ 0.89
Hoxb2P0C1T1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hoxb2P0C1T1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxb2P0C1T1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hoxb2P0C1T1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb2P0C1T1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hoxb2P0C1T1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hoxb2P0C1T1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.53■□□□□ 0.88
Hoxb2P0C1T1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxb2P0C1T1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hoxb2P0C1T1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.52■□□□□ 0.88
Hoxb2P0C1T1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.52■□□□□ 0.88
Hoxb2P0C1T1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxb2P0C1T1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hoxb2P0C1T1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.51■□□□□ 0.87
Hoxb2P0C1T1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxb2P0C1T1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.51■□□□□ 0.87
Hoxb2P0C1T1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hoxb2P0C1T1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hoxb2P0C1T1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hoxb2P0C1T1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hoxb2P0C1T1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.49■□□□□ 0.87
Hoxb2P0C1T1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hoxb2P0C1T1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.48■□□□□ 0.87
Hoxb2P0C1T1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hoxb2P0C1T1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxb2P0C1T1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxb2P0C1T1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.46■□□□□ 0.87
Hoxb2P0C1T1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hoxb2P0C1T1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Hoxb2P0C1T1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.45■□□□□ 0.86
Hoxb2P0C1T1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hoxb2P0C1T1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hoxb2P0C1T1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxb2P0C1T1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hoxb2P0C1T1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxb2P0C1T1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxb2P0C1T1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxb2P0C1T1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxb2P0C1T1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hoxb2P0C1T1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hoxb2P0C1T1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hoxb2P0C1T1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxb2P0C1T1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxb2P0C1T1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hoxb2P0C1T1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hoxb2P0C1T1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.39■□□□□ 0.85
Hoxb2P0C1T1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Hoxb2P0C1T1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxb2P0C1T1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxb2P0C1T1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hoxb2P0C1T1 Gm11175-201ENSMUST00000116172 543 ntBASIC20.38■□□□□ 0.85
Hoxb2P0C1T1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxb2P0C1T1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxb2P0C1T1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxb2P0C1T1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxb2P0C1T1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.36■□□□□ 0.85
Hoxb2P0C1T1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Hoxb2P0C1T1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxb2P0C1T1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.35■□□□□ 0.85
Hoxb2P0C1T1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxb2P0C1T1 Gm6311-201ENSMUST00000073790 878 ntBASIC20.35■□□□□ 0.85
Hoxb2P0C1T1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxb2P0C1T1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.34■□□□□ 0.85
Hoxb2P0C1T1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Hoxb2P0C1T1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxb2P0C1T1 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.33■□□□□ 0.84
Hoxb2P0C1T1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxb2P0C1T1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.32■□□□□ 0.84
Hoxb2P0C1T1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxb2P0C1T1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxb2P0C1T1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxb2P0C1T1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxb2P0C1T1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.31■□□□□ 0.84
Hoxb2P0C1T1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxb2P0C1T1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxb2P0C1T1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxb2P0C1T1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms