Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.97■■□□□ 1.11
Ctla4P09793 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ctla4P09793 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ctla4P09793 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ctla4P09793 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ctla4P09793 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ctla4P09793 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ctla4P09793 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ctla4P09793 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Ctla4P09793 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.94■■□□□ 1.1
Ctla4P09793 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.94■■□□□ 1.1
Ctla4P09793 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ctla4P09793 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ctla4P09793 Particl-201ENSMUST00000205370 1560 ntBASIC21.93■■□□□ 1.1
Ctla4P09793 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ctla4P09793 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.93■■□□□ 1.1
Ctla4P09793 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ctla4P09793 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ctla4P09793 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ctla4P09793 Gm11599-201ENSMUST00000118720 878 ntBASIC21.92■■□□□ 1.1
Ctla4P09793 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ctla4P09793 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Ctla4P09793 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.89■■□□□ 1.09
Ctla4P09793 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.88■■□□□ 1.09
Ctla4P09793 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ctla4P09793 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ctla4P09793 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.86■■□□□ 1.09
Ctla4P09793 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ctla4P09793 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ctla4P09793 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ctla4P09793 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ctla4P09793 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ctla4P09793 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ctla4P09793 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ctla4P09793 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ctla4P09793 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ctla4P09793 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ctla4P09793 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ctla4P09793 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ctla4P09793 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctla4P09793 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ctla4P09793 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.81■■□□□ 1.08
Ctla4P09793 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ctla4P09793 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.8■■□□□ 1.08
Ctla4P09793 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ctla4P09793 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctla4P09793 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ctla4P09793 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ctla4P09793 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.78■■□□□ 1.08
Ctla4P09793 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ctla4P09793 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctla4P09793 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ctla4P09793 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ctla4P09793 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctla4P09793 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ctla4P09793 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.74■■□□□ 1.07
Ctla4P09793 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ctla4P09793 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ctla4P09793 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ctla4P09793 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ctla4P09793 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.72■■□□□ 1.07
Ctla4P09793 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ctla4P09793 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ctla4P09793 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ctla4P09793 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ctla4P09793 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ctla4P09793 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ctla4P09793 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.69■■□□□ 1.06
Ctla4P09793 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ctla4P09793 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ctla4P09793 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ctla4P09793 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ctla4P09793 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ctla4P09793 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ctla4P09793 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ctla4P09793 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.68■■□□□ 1.06
Ctla4P09793 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.68■■□□□ 1.06
Ctla4P09793 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ctla4P09793 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ctla4P09793 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ctla4P09793 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ctla4P09793 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ctla4P09793 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ctla4P09793 Gm37136-201ENSMUST00000194368 194 ntBASIC21.66■■□□□ 1.06
Ctla4P09793 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ctla4P09793 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ctla4P09793 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctla4P09793 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ctla4P09793 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.64■■□□□ 1.06
Ctla4P09793 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.64■■□□□ 1.06
Ctla4P09793 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ctla4P09793 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctla4P09793 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ctla4P09793 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctla4P09793 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ctla4P09793 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ctla4P09793 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ctla4P09793 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.62■■□□□ 1.05
Ctla4P09793 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.62■■□□□ 1.05
Ctla4P09793 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms