Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Abcd4O89016 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcd4O89016 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Abcd4O89016 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Abcd4O89016 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Abcd4O89016 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Abcd4O89016 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.19■□□□□ 0.98
Abcd4O89016 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.18■□□□□ 0.98
Abcd4O89016 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.18■□□□□ 0.98
Abcd4O89016 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.17■□□□□ 0.98
Abcd4O89016 Gm30023-201ENSMUST00000197970 889 ntBASIC21.17■□□□□ 0.98
Abcd4O89016 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.17■□□□□ 0.98
Abcd4O89016 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Abcd4O89016 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Abcd4O89016 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Abcd4O89016 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Abcd4O89016 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Abcd4O89016 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Abcd4O89016 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcd4O89016 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcd4O89016 Particl-201ENSMUST00000205370 1560 ntBASIC21.13■□□□□ 0.97
Abcd4O89016 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcd4O89016 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcd4O89016 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcd4O89016 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcd4O89016 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcd4O89016 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcd4O89016 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcd4O89016 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcd4O89016 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Abcd4O89016 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.1■□□□□ 0.97
Abcd4O89016 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Abcd4O89016 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Abcd4O89016 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.1■□□□□ 0.97
Abcd4O89016 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Abcd4O89016 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.09■□□□□ 0.97
Abcd4O89016 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abcd4O89016 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.09■□□□□ 0.97
Abcd4O89016 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.09■□□□□ 0.97
Abcd4O89016 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abcd4O89016 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Abcd4O89016 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Abcd4O89016 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Abcd4O89016 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcd4O89016 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abcd4O89016 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcd4O89016 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abcd4O89016 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Abcd4O89016 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcd4O89016 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Abcd4O89016 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Abcd4O89016 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.05■□□□□ 0.96
Abcd4O89016 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Abcd4O89016 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Abcd4O89016 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abcd4O89016 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcd4O89016 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Abcd4O89016 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Abcd4O89016 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Abcd4O89016 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Abcd4O89016 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abcd4O89016 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Abcd4O89016 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Abcd4O89016 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Abcd4O89016 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Abcd4O89016 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21■□□□□ 0.95
Abcd4O89016 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcd4O89016 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Abcd4O89016 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Abcd4O89016 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abcd4O89016 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abcd4O89016 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcd4O89016 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Abcd4O89016 Gm6311-201ENSMUST00000073790 878 ntBASIC20.98■□□□□ 0.95
Abcd4O89016 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcd4O89016 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Abcd4O89016 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcd4O89016 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcd4O89016 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Abcd4O89016 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcd4O89016 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Abcd4O89016 Mir6538-201ENSMUST00000183713 110 ntBASIC20.97■□□□□ 0.95
Abcd4O89016 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Abcd4O89016 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abcd4O89016 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Abcd4O89016 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abcd4O89016 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Abcd4O89016 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.97■□□□□ 0.95
Abcd4O89016 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Abcd4O89016 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.96■□□□□ 0.95
Abcd4O89016 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abcd4O89016 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abcd4O89016 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.95■□□□□ 0.94
Abcd4O89016 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcd4O89016 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Abcd4O89016 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Abcd4O89016 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Abcd4O89016 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Abcd4O89016 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abcd4O89016 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms