Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hdac3O88895 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Hdac3O88895 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac3O88895 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac3O88895 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.85■□□□□ 0.93
Hdac3O88895 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hdac3O88895 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac3O88895 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac3O88895 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac3O88895 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.83■□□□□ 0.92
Hdac3O88895 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac3O88895 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
Hdac3O88895 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Hdac3O88895 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac3O88895 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac3O88895 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Hdac3O88895 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac3O88895 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.8■□□□□ 0.92
Hdac3O88895 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac3O88895 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hdac3O88895 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac3O88895 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac3O88895 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac3O88895 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Hdac3O88895 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac3O88895 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac3O88895 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac3O88895 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac3O88895 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hdac3O88895 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hdac3O88895 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac3O88895 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac3O88895 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac3O88895 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac3O88895 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac3O88895 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac3O88895 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.74■□□□□ 0.91
Hdac3O88895 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac3O88895 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac3O88895 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac3O88895 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac3O88895 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac3O88895 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac3O88895 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.73■□□□□ 0.91
Hdac3O88895 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.73■□□□□ 0.91
Hdac3O88895 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.72■□□□□ 0.91
Hdac3O88895 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac3O88895 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.71■□□□□ 0.91
Hdac3O88895 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac3O88895 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac3O88895 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac3O88895 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac3O88895 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac3O88895 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac3O88895 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac3O88895 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac3O88895 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac3O88895 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac3O88895 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac3O88895 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac3O88895 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac3O88895 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac3O88895 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac3O88895 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac3O88895 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac3O88895 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.68■□□□□ 0.9
Hdac3O88895 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hdac3O88895 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac3O88895 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Hdac3O88895 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hdac3O88895 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Hdac3O88895 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.66■□□□□ 0.9
Hdac3O88895 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac3O88895 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac3O88895 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac3O88895 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac3O88895 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hdac3O88895 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac3O88895 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac3O88895 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Hdac3O88895 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac3O88895 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac3O88895 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Hdac3O88895 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac3O88895 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac3O88895 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hdac3O88895 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hdac3O88895 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Hdac3O88895 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac3O88895 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hdac3O88895 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac3O88895 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac3O88895 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac3O88895 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac3O88895 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac3O88895 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hdac3O88895 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac3O88895 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hdac3O88895 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hdac3O88895 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms