Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh2d1aO88890 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d1aO88890 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh2d1aO88890 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d1aO88890 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sh2d1aO88890 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d1aO88890 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Sh2d1aO88890 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh2d1aO88890 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d1aO88890 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d1aO88890 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d1aO88890 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Sh2d1aO88890 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d1aO88890 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d1aO88890 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sh2d1aO88890 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d1aO88890 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d1aO88890 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d1aO88890 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d1aO88890 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sh2d1aO88890 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d1aO88890 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Sh2d1aO88890 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.43■□□□□ 0.22
Sh2d1aO88890 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d1aO88890 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d1aO88890 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d1aO88890 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sh2d1aO88890 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d1aO88890 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d1aO88890 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d1aO88890 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sh2d1aO88890 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d1aO88890 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d1aO88890 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sh2d1aO88890 Gm30023-201ENSMUST00000197970 889 ntBASIC16.41■□□□□ 0.22
Sh2d1aO88890 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sh2d1aO88890 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d1aO88890 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.4■□□□□ 0.22
Sh2d1aO88890 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d1aO88890 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d1aO88890 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d1aO88890 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d1aO88890 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d1aO88890 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh2d1aO88890 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.39■□□□□ 0.21
Sh2d1aO88890 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh2d1aO88890 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh2d1aO88890 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh2d1aO88890 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh2d1aO88890 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh2d1aO88890 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sh2d1aO88890 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sh2d1aO88890 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d1aO88890 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d1aO88890 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d1aO88890 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d1aO88890 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d1aO88890 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.36■□□□□ 0.21
Sh2d1aO88890 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.36■□□□□ 0.21
Sh2d1aO88890 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d1aO88890 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d1aO88890 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d1aO88890 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sh2d1aO88890 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sh2d1aO88890 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d1aO88890 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d1aO88890 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d1aO88890 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d1aO88890 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d1aO88890 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.35■□□□□ 0.21
Sh2d1aO88890 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d1aO88890 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d1aO88890 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d1aO88890 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d1aO88890 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d1aO88890 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh2d1aO88890 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh2d1aO88890 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d1aO88890 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d1aO88890 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.33■□□□□ 0.2
Sh2d1aO88890 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d1aO88890 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d1aO88890 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.33■□□□□ 0.2
Sh2d1aO88890 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d1aO88890 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d1aO88890 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d1aO88890 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.32■□□□□ 0.2
Sh2d1aO88890 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d1aO88890 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d1aO88890 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d1aO88890 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d1aO88890 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d1aO88890 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms