Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Tnfrsf17O88472 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnfrsf17O88472 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Tnfrsf17O88472 Gm45364-201ENSMUST00000210883 159 ntBASIC22.49■■□□□ 1.19
Tnfrsf17O88472 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnfrsf17O88472 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.48■■□□□ 1.19
Tnfrsf17O88472 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnfrsf17O88472 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnfrsf17O88472 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnfrsf17O88472 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnfrsf17O88472 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tnfrsf17O88472 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Tnfrsf17O88472 Gm15546-201ENSMUST00000122095 826 ntBASIC22.45■■□□□ 1.18
Tnfrsf17O88472 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf17O88472 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.44■■□□□ 1.18
Tnfrsf17O88472 Gm5921-201ENSMUST00000075898 882 ntBASIC22.44■■□□□ 1.18
Tnfrsf17O88472 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf17O88472 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf17O88472 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf17O88472 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf17O88472 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf17O88472 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.42■■□□□ 1.18
Tnfrsf17O88472 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.42■■□□□ 1.18
Tnfrsf17O88472 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf17O88472 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf17O88472 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf17O88472 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Tnfrsf17O88472 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.41■■□□□ 1.18
Tnfrsf17O88472 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf17O88472 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Tnfrsf17O88472 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tnfrsf17O88472 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Tnfrsf17O88472 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tnfrsf17O88472 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf17O88472 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.38■■□□□ 1.17
Tnfrsf17O88472 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf17O88472 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tnfrsf17O88472 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tnfrsf17O88472 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.36■■□□□ 1.17
Tnfrsf17O88472 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf17O88472 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.36■■□□□ 1.17
Tnfrsf17O88472 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf17O88472 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf17O88472 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf17O88472 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.34■■□□□ 1.17
Tnfrsf17O88472 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf17O88472 Gm10420-201ENSMUST00000121713 882 ntBASIC22.33■■□□□ 1.17
Tnfrsf17O88472 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf17O88472 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf17O88472 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.31■■□□□ 1.16
Tnfrsf17O88472 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnfrsf17O88472 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Tnfrsf17O88472 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.3■■□□□ 1.16
Tnfrsf17O88472 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Tnfrsf17O88472 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Tnfrsf17O88472 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.29■■□□□ 1.16
Tnfrsf17O88472 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.29■■□□□ 1.16
Tnfrsf17O88472 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tnfrsf17O88472 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Tnfrsf17O88472 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnfrsf17O88472 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.28■■□□□ 1.16
Tnfrsf17O88472 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Tnfrsf17O88472 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.26■■□□□ 1.15
Tnfrsf17O88472 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Tnfrsf17O88472 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnfrsf17O88472 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnfrsf17O88472 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.26■■□□□ 1.15
Tnfrsf17O88472 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Tnfrsf17O88472 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnfrsf17O88472 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.24■■□□□ 1.15
Tnfrsf17O88472 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.24■■□□□ 1.15
Tnfrsf17O88472 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tnfrsf17O88472 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tnfrsf17O88472 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.24■■□□□ 1.15
Tnfrsf17O88472 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.23■■□□□ 1.15
Tnfrsf17O88472 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.23■■□□□ 1.15
Tnfrsf17O88472 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnfrsf17O88472 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.22■■□□□ 1.15
Tnfrsf17O88472 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnfrsf17O88472 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Tnfrsf17O88472 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.21■■□□□ 1.15
Tnfrsf17O88472 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tnfrsf17O88472 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tnfrsf17O88472 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tnfrsf17O88472 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tnfrsf17O88472 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tnfrsf17O88472 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tnfrsf17O88472 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tnfrsf17O88472 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.2■■□□□ 1.14
Tnfrsf17O88472 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tnfrsf17O88472 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.19■■□□□ 1.14
Tnfrsf17O88472 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tnfrsf17O88472 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tnfrsf17O88472 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Tnfrsf17O88472 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnfrsf17O88472 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Tnfrsf17O88472 Rps24-207ENSMUST00000224568 714 ntBASIC22.16■■□□□ 1.14
Tnfrsf17O88472 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Tnfrsf17O88472 Gm37136-201ENSMUST00000194368 194 ntBASIC22.15■■□□□ 1.14
Tnfrsf17O88472 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms