Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.45■□□□□ 0.54
Gm10226O88253 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm10226O88253 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10226O88253 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10226O88253 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10226O88253 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Gm10226O88253 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10226O88253 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10226O88253 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10226O88253 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm10226O88253 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm10226O88253 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm10226O88253 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm10226O88253 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10226O88253 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10226O88253 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm10226O88253 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.36■□□□□ 0.53
Gm10226O88253 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm10226O88253 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.35■□□□□ 0.53
Gm10226O88253 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.34■□□□□ 0.53
Gm10226O88253 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm10226O88253 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.33■□□□□ 0.53
Gm10226O88253 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm10226O88253 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm10226O88253 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm10226O88253 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm10226O88253 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm10226O88253 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm10226O88253 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm10226O88253 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm10226O88253 Gm37136-201ENSMUST00000194368 194 ntBASIC18.3■□□□□ 0.52
Gm10226O88253 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm10226O88253 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm10226O88253 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.29■□□□□ 0.52
Gm10226O88253 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm10226O88253 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm10226O88253 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm10226O88253 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.28■□□□□ 0.52
Gm10226O88253 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm10226O88253 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm10226O88253 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm10226O88253 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm10226O88253 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm10226O88253 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm10226O88253 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm10226O88253 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm10226O88253 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm10226O88253 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm10226O88253 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm10226O88253 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm10226O88253 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm10226O88253 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm10226O88253 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.23■□□□□ 0.51
Gm10226O88253 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.23■□□□□ 0.51
Gm10226O88253 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Gm10226O88253 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Gm10226O88253 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm10226O88253 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.22■□□□□ 0.51
Gm10226O88253 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm10226O88253 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm10226O88253 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10226O88253 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10226O88253 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm10226O88253 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm10226O88253 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm10226O88253 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.2■□□□□ 0.5
Gm10226O88253 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10226O88253 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10226O88253 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10226O88253 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10226O88253 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10226O88253 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm10226O88253 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm10226O88253 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gm10226O88253 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm10226O88253 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm10226O88253 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10226O88253 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Gm10226O88253 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10226O88253 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm10226O88253 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10226O88253 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10226O88253 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm10226O88253 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.15■□□□□ 0.5
Gm10226O88253 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm10226O88253 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm10226O88253 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10226O88253 Gm4799-201ENSMUST00000095396 657 ntBASIC18.14■□□□□ 0.49
Gm10226O88253 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.14■□□□□ 0.49
Gm10226O88253 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10226O88253 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10226O88253 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10226O88253 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10226O88253 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10226O88253 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.12■□□□□ 0.49
Gm10226O88253 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.11■□□□□ 0.49
Gm10226O88253 Gm6311-201ENSMUST00000073790 878 ntBASIC18.11■□□□□ 0.49
Gm10226O88253 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10226O88253 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10226O88253 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms