Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DffbO54788 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
DffbO54788 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.03■□□□□ 0.8
DffbO54788 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DffbO54788 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DffbO54788 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.02■□□□□ 0.8
DffbO54788 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.02■□□□□ 0.8
DffbO54788 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DffbO54788 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DffbO54788 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DffbO54788 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DffbO54788 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
DffbO54788 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DffbO54788 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DffbO54788 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20■□□□□ 0.79
DffbO54788 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20■□□□□ 0.79
DffbO54788 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20■□□□□ 0.79
DffbO54788 Zfp131-205ENSMUST00000223812 663 ntBASIC20■□□□□ 0.79
DffbO54788 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DffbO54788 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DffbO54788 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DffbO54788 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DffbO54788 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20■□□□□ 0.79
DffbO54788 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DffbO54788 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
DffbO54788 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
DffbO54788 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DffbO54788 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DffbO54788 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
DffbO54788 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.97■□□□□ 0.79
DffbO54788 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DffbO54788 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DffbO54788 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DffbO54788 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.96■□□□□ 0.79
DffbO54788 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
DffbO54788 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
DffbO54788 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.95■□□□□ 0.78
DffbO54788 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
DffbO54788 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DffbO54788 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.95■□□□□ 0.78
DffbO54788 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DffbO54788 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DffbO54788 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DffbO54788 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DffbO54788 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DffbO54788 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DffbO54788 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.94■□□□□ 0.78
DffbO54788 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DffbO54788 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.94■□□□□ 0.78
DffbO54788 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DffbO54788 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DffbO54788 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.93■□□□□ 0.78
DffbO54788 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DffbO54788 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.93■□□□□ 0.78
DffbO54788 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DffbO54788 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DffbO54788 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DffbO54788 Gm9397-201ENSMUST00000200125 605 ntBASIC19.92■□□□□ 0.78
DffbO54788 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DffbO54788 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DffbO54788 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DffbO54788 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DffbO54788 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DffbO54788 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DffbO54788 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DffbO54788 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
DffbO54788 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DffbO54788 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DffbO54788 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
DffbO54788 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DffbO54788 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DffbO54788 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DffbO54788 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DffbO54788 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DffbO54788 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DffbO54788 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DffbO54788 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DffbO54788 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DffbO54788 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DffbO54788 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DffbO54788 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DffbO54788 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DffbO54788 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DffbO54788 Gm24970-201ENSMUST00000175582 82 ntBASIC19.87■□□□□ 0.77
DffbO54788 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
DffbO54788 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DffbO54788 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DffbO54788 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DffbO54788 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.86■□□□□ 0.77
DffbO54788 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DffbO54788 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DffbO54788 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DffbO54788 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DffbO54788 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DffbO54788 Gm30023-201ENSMUST00000197970 889 ntBASIC19.84■□□□□ 0.77
DffbO54788 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DffbO54788 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DffbO54788 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DffbO54788 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DffbO54788 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms