Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccr6O54689 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccr6O54689 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccr6O54689 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccr6O54689 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ccr6O54689 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccr6O54689 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccr6O54689 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccr6O54689 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccr6O54689 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccr6O54689 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccr6O54689 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccr6O54689 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccr6O54689 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccr6O54689 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccr6O54689 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccr6O54689 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccr6O54689 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccr6O54689 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccr6O54689 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccr6O54689 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccr6O54689 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccr6O54689 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccr6O54689 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccr6O54689 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccr6O54689 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccr6O54689 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccr6O54689 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.81■□□□□ 0.76
Ccr6O54689 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccr6O54689 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccr6O54689 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccr6O54689 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccr6O54689 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccr6O54689 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccr6O54689 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccr6O54689 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccr6O54689 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Ccr6O54689 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccr6O54689 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Ccr6O54689 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ccr6O54689 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccr6O54689 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccr6O54689 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccr6O54689 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccr6O54689 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccr6O54689 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ccr6O54689 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ccr6O54689 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccr6O54689 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccr6O54689 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccr6O54689 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccr6O54689 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccr6O54689 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccr6O54689 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccr6O54689 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccr6O54689 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccr6O54689 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccr6O54689 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.74■□□□□ 0.75
Ccr6O54689 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccr6O54689 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccr6O54689 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccr6O54689 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccr6O54689 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccr6O54689 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccr6O54689 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccr6O54689 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccr6O54689 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccr6O54689 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccr6O54689 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccr6O54689 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccr6O54689 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ccr6O54689 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccr6O54689 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccr6O54689 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccr6O54689 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccr6O54689 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccr6O54689 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr6O54689 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr6O54689 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr6O54689 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccr6O54689 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr6O54689 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr6O54689 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr6O54689 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccr6O54689 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccr6O54689 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr6O54689 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccr6O54689 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccr6O54689 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccr6O54689 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccr6O54689 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccr6O54689 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms