Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.83■■■□□ 2.05
Slc1a4O35874 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Slc1a4O35874 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Slc1a4O35874 Particl-201ENSMUST00000205370 1560 ntBASIC27.82■■■□□ 2.04
Slc1a4O35874 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
Slc1a4O35874 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
Slc1a4O35874 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
Slc1a4O35874 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.81■■■□□ 2.04
Slc1a4O35874 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Slc1a4O35874 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Slc1a4O35874 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.8■■■□□ 2.04
Slc1a4O35874 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Slc1a4O35874 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Slc1a4O35874 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.78■■■□□ 2.04
Slc1a4O35874 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Slc1a4O35874 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Slc1a4O35874 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.77■■■□□ 2.04
Slc1a4O35874 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Slc1a4O35874 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.77■■■□□ 2.04
Slc1a4O35874 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Slc1a4O35874 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Slc1a4O35874 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Slc1a4O35874 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
Slc1a4O35874 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Slc1a4O35874 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Slc1a4O35874 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Slc1a4O35874 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
Slc1a4O35874 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Slc1a4O35874 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Slc1a4O35874 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Slc1a4O35874 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.7■■■□□ 2.03
Slc1a4O35874 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Slc1a4O35874 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
Slc1a4O35874 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Slc1a4O35874 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
Slc1a4O35874 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.69■■■□□ 2.02
Slc1a4O35874 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Slc1a4O35874 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.67■■■□□ 2.02
Slc1a4O35874 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Slc1a4O35874 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Slc1a4O35874 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Slc1a4O35874 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Slc1a4O35874 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Slc1a4O35874 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.66■■■□□ 2.02
Slc1a4O35874 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Slc1a4O35874 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Slc1a4O35874 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.63■■■□□ 2.01
Slc1a4O35874 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Slc1a4O35874 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Slc1a4O35874 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Slc1a4O35874 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Slc1a4O35874 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.58■■■□□ 2.01
Slc1a4O35874 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2
Slc1a4O35874 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Slc1a4O35874 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Slc1a4O35874 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.56■■■□□ 2
Slc1a4O35874 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Slc1a4O35874 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Slc1a4O35874 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Slc1a4O35874 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
Slc1a4O35874 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
Slc1a4O35874 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.51■■□□□ 1.99
Slc1a4O35874 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Slc1a4O35874 Gm37136-201ENSMUST00000194368 194 ntBASIC27.5■■□□□ 1.99
Slc1a4O35874 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Slc1a4O35874 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Slc1a4O35874 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Slc1a4O35874 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Slc1a4O35874 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Slc1a4O35874 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Slc1a4O35874 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Slc1a4O35874 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Slc1a4O35874 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Slc1a4O35874 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.47■■□□□ 1.99
Slc1a4O35874 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.47■■□□□ 1.99
Slc1a4O35874 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Slc1a4O35874 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Slc1a4O35874 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Slc1a4O35874 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Slc1a4O35874 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Slc1a4O35874 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Slc1a4O35874 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Slc1a4O35874 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Slc1a4O35874 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.43■■□□□ 1.98
Slc1a4O35874 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Slc1a4O35874 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Slc1a4O35874 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Slc1a4O35874 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Slc1a4O35874 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Slc1a4O35874 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Slc1a4O35874 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.39■■□□□ 1.98
Slc1a4O35874 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.39■■□□□ 1.98
Slc1a4O35874 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Slc1a4O35874 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Slc1a4O35874 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Slc1a4O35874 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Slc1a4O35874 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.38■■□□□ 1.97
Slc1a4O35874 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Slc1a4O35874 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Slc1a4O35874 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms