Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.24■□□□□ 0.83
Atf6bO35451 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6bO35451 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6bO35451 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6bO35451 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6bO35451 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6bO35451 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6bO35451 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
Atf6bO35451 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.22■□□□□ 0.83
Atf6bO35451 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6bO35451 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6bO35451 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Atf6bO35451 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
Atf6bO35451 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atf6bO35451 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf6bO35451 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf6bO35451 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Atf6bO35451 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6bO35451 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6bO35451 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6bO35451 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atf6bO35451 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.19■□□□□ 0.82
Atf6bO35451 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Atf6bO35451 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Atf6bO35451 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6bO35451 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6bO35451 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.17■□□□□ 0.82
Atf6bO35451 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6bO35451 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.17■□□□□ 0.82
Atf6bO35451 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6bO35451 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6bO35451 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Atf6bO35451 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf6bO35451 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.15■□□□□ 0.82
Atf6bO35451 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf6bO35451 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Atf6bO35451 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Atf6bO35451 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf6bO35451 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6bO35451 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6bO35451 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6bO35451 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6bO35451 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf6bO35451 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6bO35451 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atf6bO35451 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6bO35451 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6bO35451 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6bO35451 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6bO35451 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6bO35451 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf6bO35451 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6bO35451 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6bO35451 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6bO35451 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Atf6bO35451 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atf6bO35451 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.1■□□□□ 0.81
Atf6bO35451 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.1■□□□□ 0.81
Atf6bO35451 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Atf6bO35451 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Atf6bO35451 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf6bO35451 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6bO35451 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6bO35451 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6bO35451 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atf6bO35451 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6bO35451 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Atf6bO35451 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6bO35451 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atf6bO35451 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Atf6bO35451 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6bO35451 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6bO35451 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.06■□□□□ 0.8
Atf6bO35451 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atf6bO35451 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf6bO35451 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atf6bO35451 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Atf6bO35451 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6bO35451 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6bO35451 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6bO35451 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.04■□□□□ 0.8
Atf6bO35451 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.04■□□□□ 0.8
Atf6bO35451 Gm7432-201ENSMUST00000210343 879 ntBASIC20.04■□□□□ 0.8
Atf6bO35451 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6bO35451 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atf6bO35451 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.03■□□□□ 0.8
Atf6bO35451 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Atf6bO35451 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atf6bO35451 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atf6bO35451 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6bO35451 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
Atf6bO35451 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf6bO35451 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.01■□□□□ 0.79
Atf6bO35451 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20■□□□□ 0.79
Atf6bO35451 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf6bO35451 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf6bO35451 Particl-201ENSMUST00000205370 1560 ntBASIC20■□□□□ 0.79
Atf6bO35451 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.99■□□□□ 0.79
Atf6bO35451 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.99■□□□□ 0.79
Atf6bO35451 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms