Protein–RNA interactions for Protein: O08859

Tnfaip6, Tumor necrosis factor-inducible gene 6 protein, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip6O08859 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip6O08859 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfaip6O08859 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.39■□□□□ 0.69
Tnfaip6O08859 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.38■□□□□ 0.69
Tnfaip6O08859 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfaip6O08859 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
Tnfaip6O08859 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tnfaip6O08859 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip6O08859 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfaip6O08859 Gm6821-201ENSMUST00000107540 542 ntBASIC19.36■□□□□ 0.69
Tnfaip6O08859 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfaip6O08859 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfaip6O08859 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnfaip6O08859 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfaip6O08859 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfaip6O08859 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfaip6O08859 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfaip6O08859 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tnfaip6O08859 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfaip6O08859 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfaip6O08859 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfaip6O08859 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfaip6O08859 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfaip6O08859 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfaip6O08859 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfaip6O08859 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tnfaip6O08859 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip6O08859 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip6O08859 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip6O08859 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfaip6O08859 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tnfaip6O08859 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.3■□□□□ 0.68
Tnfaip6O08859 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip6O08859 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.29■□□□□ 0.68
Tnfaip6O08859 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip6O08859 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip6O08859 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip6O08859 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfaip6O08859 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.28■□□□□ 0.68
Tnfaip6O08859 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip6O08859 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfaip6O08859 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfaip6O08859 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tnfaip6O08859 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfaip6O08859 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnfaip6O08859 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip6O08859 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.26■□□□□ 0.67
Tnfaip6O08859 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.26■□□□□ 0.67
Tnfaip6O08859 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip6O08859 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip6O08859 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip6O08859 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tnfaip6O08859 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip6O08859 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnfaip6O08859 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfaip6O08859 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip6O08859 Gm8503-201ENSMUST00000118131 455 ntBASIC19.23■□□□□ 0.67
Tnfaip6O08859 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip6O08859 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip6O08859 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip6O08859 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip6O08859 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfaip6O08859 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfaip6O08859 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tnfaip6O08859 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip6O08859 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip6O08859 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tnfaip6O08859 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip6O08859 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip6O08859 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.19■□□□□ 0.66
Tnfaip6O08859 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.19■□□□□ 0.66
Tnfaip6O08859 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfaip6O08859 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip6O08859 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.18■□□□□ 0.66
Tnfaip6O08859 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.18■□□□□ 0.66
Tnfaip6O08859 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfaip6O08859 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.18■□□□□ 0.66
Tnfaip6O08859 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.17■□□□□ 0.66
Tnfaip6O08859 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.17■□□□□ 0.66
Tnfaip6O08859 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfaip6O08859 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfaip6O08859 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfaip6O08859 Particl-201ENSMUST00000205370 1560 ntBASIC19.15■□□□□ 0.66
Tnfaip6O08859 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfaip6O08859 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Tnfaip6O08859 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip6O08859 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfaip6O08859 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfaip6O08859 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Tnfaip6O08859 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.13■□□□□ 0.65
Tnfaip6O08859 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfaip6O08859 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfaip6O08859 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfaip6O08859 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tnfaip6O08859 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.12■□□□□ 0.65
Tnfaip6O08859 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip6O08859 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip6O08859 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfaip6O08859 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tnfaip6O08859 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms