Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ercc2O08811 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Ercc2O08811 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ercc2O08811 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Ercc2O08811 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ercc2O08811 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ercc2O08811 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ercc2O08811 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ercc2O08811 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.22■■□□□ 1.47
Ercc2O08811 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ercc2O08811 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.22■■□□□ 1.47
Ercc2O08811 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ercc2O08811 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.21■■□□□ 1.47
Ercc2O08811 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ercc2O08811 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Ercc2O08811 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ercc2O08811 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ercc2O08811 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ercc2O08811 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ercc2O08811 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ercc2O08811 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ercc2O08811 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ercc2O08811 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ercc2O08811 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ercc2O08811 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ercc2O08811 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ercc2O08811 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.16■■□□□ 1.46
Ercc2O08811 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ercc2O08811 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ercc2O08811 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ercc2O08811 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.15■■□□□ 1.46
Ercc2O08811 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.14■■□□□ 1.46
Ercc2O08811 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Ercc2O08811 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Ercc2O08811 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Ercc2O08811 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ercc2O08811 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.11■■□□□ 1.45
Ercc2O08811 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ercc2O08811 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ercc2O08811 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ercc2O08811 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ercc2O08811 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ercc2O08811 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ercc2O08811 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ercc2O08811 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ercc2O08811 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ercc2O08811 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ercc2O08811 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.06■■□□□ 1.44
Ercc2O08811 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.06■■□□□ 1.44
Ercc2O08811 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.06■■□□□ 1.44
Ercc2O08811 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Ercc2O08811 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ercc2O08811 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.05■■□□□ 1.44
Ercc2O08811 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ercc2O08811 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ercc2O08811 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Ercc2O08811 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ercc2O08811 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ercc2O08811 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ercc2O08811 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Ercc2O08811 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Ercc2O08811 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Ercc2O08811 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ercc2O08811 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Ercc2O08811 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
Ercc2O08811 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc2O08811 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Ercc2O08811 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24■■□□□ 1.43
Ercc2O08811 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Ercc2O08811 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ercc2O08811 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc2O08811 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ercc2O08811 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ercc2O08811 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ercc2O08811 Particl-201ENSMUST00000205370 1560 ntBASIC23.98■■□□□ 1.43
Ercc2O08811 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ercc2O08811 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.98■■□□□ 1.43
Ercc2O08811 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ercc2O08811 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ercc2O08811 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ercc2O08811 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ercc2O08811 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ercc2O08811 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ercc2O08811 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ercc2O08811 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.95■■□□□ 1.42
Ercc2O08811 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.42
Ercc2O08811 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ercc2O08811 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ercc2O08811 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ercc2O08811 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ercc2O08811 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Ercc2O08811 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ercc2O08811 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Ercc2O08811 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Ercc2O08811 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ercc2O08811 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ercc2O08811 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ercc2O08811 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ercc2O08811 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Ercc2O08811 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms