Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Gm3727J3QM54 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3727J3QM54 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3727J3QM54 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3727J3QM54 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3727J3QM54 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Gm3727J3QM54 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.93■□□□□ 0.78
Gm3727J3QM54 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Gm3727J3QM54 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.93■□□□□ 0.78
Gm3727J3QM54 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3727J3QM54 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3727J3QM54 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3727J3QM54 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Gm3727J3QM54 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Gm3727J3QM54 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3727J3QM54 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3727J3QM54 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3727J3QM54 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3727J3QM54 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3727J3QM54 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3727J3QM54 Gm25262-201ENSMUST00000174934 133 ntBASIC19.88■□□□□ 0.77
Gm3727J3QM54 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3727J3QM54 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3727J3QM54 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Gm3727J3QM54 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.87■□□□□ 0.77
Gm3727J3QM54 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3727J3QM54 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3727J3QM54 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Gm3727J3QM54 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3727J3QM54 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3727J3QM54 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3727J3QM54 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3727J3QM54 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3727J3QM54 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Gm3727J3QM54 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3727J3QM54 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3727J3QM54 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3727J3QM54 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm3727J3QM54 Peli2-204ENSMUST00000226513 1320 ntBASIC19.83■□□□□ 0.77
Gm3727J3QM54 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm3727J3QM54 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.83■□□□□ 0.77
Gm3727J3QM54 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm3727J3QM54 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gm3727J3QM54 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm3727J3QM54 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm3727J3QM54 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Gm3727J3QM54 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm3727J3QM54 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm3727J3QM54 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm3727J3QM54 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm3727J3QM54 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm3727J3QM54 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm3727J3QM54 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Gm3727J3QM54 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3727J3QM54 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm3727J3QM54 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Gm3727J3QM54 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm3727J3QM54 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm3727J3QM54 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm3727J3QM54 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm3727J3QM54 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gm3727J3QM54 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.77■□□□□ 0.76
Gm3727J3QM54 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Gm3727J3QM54 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gm3727J3QM54 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Gm3727J3QM54 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3727J3QM54 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.76■□□□□ 0.75
Gm3727J3QM54 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3727J3QM54 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Gm3727J3QM54 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3727J3QM54 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3727J3QM54 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm3727J3QM54 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3727J3QM54 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3727J3QM54 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3727J3QM54 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms