Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh1F7BJK1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh1F7BJK1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh1F7BJK1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh1F7BJK1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdh1F7BJK1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pcdh1F7BJK1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh1F7BJK1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh1F7BJK1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh1F7BJK1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh1F7BJK1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh1F7BJK1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh1F7BJK1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh1F7BJK1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdh1F7BJK1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh1F7BJK1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdh1F7BJK1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh1F7BJK1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh1F7BJK1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh1F7BJK1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh1F7BJK1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.1■□□□□ 0.97
Pcdh1F7BJK1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcdh1F7BJK1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh1F7BJK1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh1F7BJK1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh1F7BJK1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdh1F7BJK1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh1F7BJK1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh1F7BJK1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh1F7BJK1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh1F7BJK1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh1F7BJK1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh1F7BJK1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdh1F7BJK1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh1F7BJK1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh1F7BJK1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Pcdh1F7BJK1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdh1F7BJK1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh1F7BJK1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh1F7BJK1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdh1F7BJK1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.04■□□□□ 0.96
Pcdh1F7BJK1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdh1F7BJK1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pcdh1F7BJK1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh1F7BJK1 Zfp131-205ENSMUST00000223812 663 ntBASIC21.02■□□□□ 0.96
Pcdh1F7BJK1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdh1F7BJK1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh1F7BJK1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh1F7BJK1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh1F7BJK1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh1F7BJK1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh1F7BJK1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh1F7BJK1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh1F7BJK1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdh1F7BJK1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcdh1F7BJK1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdh1F7BJK1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh1F7BJK1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh1F7BJK1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh1F7BJK1 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.98■□□□□ 0.95
Pcdh1F7BJK1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh1F7BJK1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Pcdh1F7BJK1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh1F7BJK1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh1F7BJK1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.96■□□□□ 0.95
Pcdh1F7BJK1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdh1F7BJK1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh1F7BJK1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdh1F7BJK1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh1F7BJK1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh1F7BJK1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh1F7BJK1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh1F7BJK1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh1F7BJK1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdh1F7BJK1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh1F7BJK1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdh1F7BJK1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh1F7BJK1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh1F7BJK1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdh1F7BJK1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.92■□□□□ 0.94
Pcdh1F7BJK1 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.92■□□□□ 0.94
Pcdh1F7BJK1 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms